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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57410.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:208 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   47->208 3ccyA PDBj 8e-11 14.2 %
:RPS:SCOP  47->101 2fbqA1  a.4.1.9 * 9e-08 12.7 %
:RPS:SCOP  102->199 1vi0A2  a.121.1.1 * 4e-04 12.2 %
:HMM:SCOP  23->101 2fbqA1 a.4.1.9 * 1.1e-15 29.1 %
:HMM:PFM   31->75 PF00440 * TetR_N 9.4e-13 37.8 45/47  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57410.1 GT:GENE BAD57410.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2732109..2732735) GB:FROM 2732109 GB:TO 2732735 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57410.1 LENGTH 208 SQ:AASEQ MQTGQDSDDAGPRIWGGTTLTERREARRAALLEAALDLIGEAGAAGVTMRAVCRRANLTDRYFYESFSSRDELLDVLYREVAEEFLDPMTAFTDADDPSRDRALAEVLVDKVLEDPRKSRLFLVEPYSSTGLGQTTIAVMPAFTRLIQDHLFVHIEDPVKRRLAAVSMASGNAGMFSAWLNGSLRATREQIVEHCVAMLGAYRTLYRS GT:EXON 1|1-208:0| SEG 16->46|ggttlterrearraalleaaldligeagaag| RP:PDB:NREP 1 RP:PDB:REP 47->208|3ccyA|8e-11|14.2|162/186| HM:PFM:NREP 1 HM:PFM:REP 31->75|PF00440|9.4e-13|37.8|45/47|TetR_N| RP:SCP:NREP 2 RP:SCP:REP 47->101|2fbqA1|9e-08|12.7|55/79|a.4.1.9| RP:SCP:REP 102->199|1vi0A2|4e-04|12.2|98/117|a.121.1.1| HM:SCP:REP 23->101|2fbqA1|1.1e-15|29.1|79/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 58 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- --------------62211-14--3311111123432443-------------------------1-1-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 77.9 SQ:SECSTR ##############################################ccHHHHHHHTTccGGGGTTTcccHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHHHHHHHHHHHcGGGTcHHHHHHHHHHHHHHGGGGTccTTccccHHHHHHHHHHHHHcGGGcccc DISOP:02AL 1-27| PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcc //