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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57413.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.17
:421 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   342->403 2qifB PDBj 2e-04 30.6 %
:RPS:PDB   341->405 2aj0A PDBj 2e-10 18.5 %
:RPS:SCOP  341->405 1fvqA  d.58.17.1 * 4e-11 23.1 %
:HMM:SCOP  340->406 1mwzA_ d.58.17.1 * 7.9e-09 24.2 %
:HMM:PFM   347->385 PF00403 * HMA 4.1e-08 35.9 39/62  
:BLT:SWISS 348->402 COPP_HELPJ 3e-05 38.2 %
:PROS 348->376|PS01047|HMA_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57413.1 GT:GENE BAD57413.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2735522..2736787) GB:FROM 2735522 GB:TO 2736787 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57413.1 LENGTH 421 SQ:AASEQ MSAHTPRYDRRAASRVLAELTEPGLFTGPLEPGEPRLVEYTATPVRGEPGSHLTTSQRMYLERFMRPCRPEQVTTATHRMTWTDSDGVPNTGHFRADGLGPLVPVAARETVLVLRRALTADTALAARIAALGPQQHAVLTGTTTDHDPLEILCVGIEAAARALAQHALLARQTPYREPGEFARGLADSGIFTAVATRWFWELQASTYRRGMIPATLVALPDGTVRYTAETVATLRAMKDATIAEAHAVMRRATTTEGLTVAEALAKYHDELDLISRQYALLGPGTRPACLAAMPHQLDGRHYTLLPLVIDRFVETFGAVVDRCRIVTAPETGEPGDEPLAAEDMVCYVPDMSCRHCVRTITATLAGMGVPVLEVDLETKRVVAEFRSPRNRARVFEALRDGGYTPVSERPRVAGPATEPVV GT:EXON 1|1-421:0| BL:SWS:NREP 1 BL:SWS:REP 348->402|COPP_HELPJ|3e-05|38.2|55/66| PROS 348->376|PS01047|HMA_1|PDOC00804| SEG 112->131|lvlrraltadtalaariaal| SEG 158->172|aaaralaqhallarq| BL:PDB:NREP 1 BL:PDB:REP 342->403|2qifB|2e-04|30.6|62/68| RP:PDB:NREP 1 RP:PDB:REP 341->405|2aj0A|2e-10|18.5|65/71| HM:PFM:NREP 1 HM:PFM:REP 347->385|PF00403|4.1e-08|35.9|39/62|HMA| RP:SCP:NREP 1 RP:SCP:REP 341->405|1fvqA|4e-11|23.1|65/72|d.58.17.1| HM:SCP:REP 340->406|1mwzA_|7.9e-09|24.2|66/0|d.58.17.1|1/1|HMA, heavy metal-associated domain| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 87 STR:RPRED 20.7 SQ:SECSTR ############################################################################################################################################################################################################################################################################################################################################ccccccccccEEEEEEEccccHHHHHHHHHHHHHcTEEEEEEccccEEEEEEEcccHHHHHHHHTTTTcEEEcEEEccccccccccc## DISOP:02AL 1-8, 416-418, 420-421| PSIPRED cccccccHHHHHHHHHHHHHcccccEEcccccccccEEEEEcccccccccccccHHHHHHHHHHHccccccHHHHHHEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccEEEEEEcHHHHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHEEccccccHHHHHccHHccccEEEHHHHHHHHHHHHHHHHHHHcEEEEcccccccccccccccccEEEcccHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccc //