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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57414.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  850/915 : Eukaryota  141/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:430 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->419 1i29A PDBj 1e-50 32.4 %
:RPS:PDB   41->427 2bkwA PDBj 3e-30 14.7 %
:RPS:SCOP  31->426 1elqA  c.67.1.3 * 1e-63 25.5 %
:HMM:SCOP  22->430 1c0nA_ c.67.1.3 * 7.5e-92 36.2 %
:RPS:PFM   41->416 PF00266 * Aminotran_5 5e-45 41.0 %
:HMM:PFM   40->418 PF00266 * Aminotran_5 9.6e-90 34.9 370/371  
:BLT:SWISS 23->419 SUFS_KLEP7 6e-57 36.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57414.1 GT:GENE BAD57414.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2736784..2738076) GB:FROM 2736784 GB:TO 2738076 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57414.1 LENGTH 430 SQ:AASEQ MRTSTPGSPTSTRPSNASPVDASFASVPALFPALADPAHTYLDSAATTQKPVPVIDTVTRYHRERTANAGRGSYPWSTALAGRITEIRARTAAFLGAGHTDEIVFTPGATAALNAVALCWGLAVLDDGDEILYSPADHASNVLPWHHLRGLLGRAGRRIDLVPYATTRRGTADIDDILARASPRTRLVTVAHLHHVYGGRTDVAALRAGLDRRVALCVDASQSAGHLPLDVTALGADFTVLAAHKMFGAPGLGVLYCGRRVHDSLLPFLPGGNSGVRVGDSGLESTGMPHLLEGGTPDIPAVLALGSALDVLESLGRDRIAAHNHLLTRRLIDGLRTVPGLDFLPGPAHGPETDGDGIVSFTLDGIAAADLGFVLAEHGFLVRTGSHCVPAAHHAAPHRDSVRVSTHVYTTVEQIDRFVRCVATIAEEVT GT:EXON 1|1-430:0| BL:SWS:NREP 1 BL:SWS:REP 23->419|SUFS_KLEP7|6e-57|36.3|386/406| SEG 2->15|rtstpgsptstrps| SEG 148->158|lrgllgragrr| SEG 390->398|paahhaaph| BL:PDB:NREP 1 BL:PDB:REP 23->419|1i29A|1e-50|32.4|386/405| RP:PDB:NREP 1 RP:PDB:REP 41->427|2bkwA|3e-30|14.7|360/374| RP:PFM:NREP 1 RP:PFM:REP 41->416|PF00266|5e-45|41.0|346/359|Aminotran_5| HM:PFM:NREP 1 HM:PFM:REP 40->418|PF00266|9.6e-90|34.9|370/371|Aminotran_5| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00266|IPR000192| RP:SCP:NREP 1 RP:SCP:REP 31->426|1elqA|1e-63|25.5|369/381|c.67.1.3| HM:SCP:REP 22->430|1c0nA_|7.5e-92|36.2|398/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 2115 OP:NHOMOORG 1030 OP:PATTERN 221-2---------1-1------221112211111-------15514511421111-1111---2-43 2461111111111142211-11221211111111114333121222112112322-12--43313154331111111122332111111111112221112413643553111111111111111111111--121544331-1365545555224522222343436665111111111111111111111213333333323333332322123343432211111221431111111111111111111131221122-3133222222111121123322222111111111111122222222222221221112222173464443443434244423337332353321553232332444321215-421111111132534111333221111111111112212222224111111223312323312211213112121111111112321231--11-111---1111111111111-1111111212-11122233223333322-134321242312211122322122222222-1-23331-11111113121122121----121---1252121562343337341----111111-1------------123332222134332222222222222232222-13323-1----33431333333333333-3333333333333333333343434433332333333333323533323332134445444445421212222222221332422211211211222222222-2---5333233212232342222122222222133333333333433221111111111111-1-11222211111111311111-1-1111111---11112-111-211121222311 11--112-31----12-11122221421122111111111-111111122323211212112--11--1-----1----------11--131-1211111---1-1-21-2---1-21-1111122-3-4B2-21211--21121-21-12--1-1--12111211-1111--212223Y332333261-221133343 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 415 STR:RPRED 96.5 SQ:SECSTR ###############ccGGGTTcHHHHHHTcTTTcTcccEEEcccccccccHHHHHTTcccHHHccccccTTcHHHHHHHHHHHHHHHHHTTccGGGTcGEEEEEEccTTHHHHHHHHHHGccTTccccEEEEEcccHHHHHHHHHHHHTTcEHHHHcEEEEccccTTccccHHHHHHHHHHccccEEEEEcEETTTTEEccHHHHHHHHHHHcTEEEEcTTTTTTccccTTTTTccEEEEEcccTcccccEEEEEEcHHHHHHTcHHHHccccccTTcHHHHHHHHTTcccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHTTTccEEccccccTcGGcTccccccEEEEcccHHHHHHHHHHTTEEccccccTcHHHHHHTTGGGEEEEccGGGTccTTcTHHHHHHHHHHHHHT DISOP:02AL 1-20| PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEEEcccccccccHHHHHHHcccccEEEEEEcccccccEEEcHHHHHHHHHcccEEEEEHHHHcccccccHHHccccEEEEccHHHcccccEEEEEEcHHHHHHcccEEccccccccHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHcccEEEEEEccccHHHHHHHHHHcccEEEEccHHccHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHcc //