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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57416.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  313/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
d.37.1
:144 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->128 3fhmA PDBj 1e-18 38.9 %
:RPS:PDB   1->132 3ctuB PDBj 6e-16 14.1 %
:RPS:SCOP  13->131 2yziA1  d.37.1.1 * 4e-23 25.4 %
:HMM:SCOP  1->66 1y5hA2 d.37.1.1 * 3.1e-09 36.5 %
:HMM:SCOP  62->145 2nycA1 d.37.1.1 * 3.1e-17 38.1 %
:RPS:PFM   16->124 PF00478 * IMPDH 2e-04 34.3 %
:HMM:PFM   4->61 PF00571 * CBS 1.4e-12 27.8 54/57  
:HMM:PFM   72->123 PF00571 * CBS 2.6e-17 40.4 52/57  
:BLT:SWISS 3->144 UMP3_ARATH 3e-18 36.6 %
:REPEAT 2|14->58|80->123

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57416.1 GT:GENE BAD57416.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2738653..2739087) GB:FROM 2738653 GB:TO 2739087 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57416.1 LENGTH 144 SQ:AASEQ MRIAEILRRKGCEVATVTPGTTVRALLAVLAEHNIGAVVVSPGGGRISGIVSERDVVRGLHEYGAGLLDTPVSDIMTTPVRTCAPEDRVDGLRRIMTEHRVRHLPVVRDDRLVGIVSIGDVVKSAISELATERQLLVDYVQGRY GT:EXON 1|1-144:0| BL:SWS:NREP 1 BL:SWS:REP 3->144|UMP3_ARATH|3e-18|36.6|142/206| NREPEAT 1 REPEAT 2|14->58|80->123| BL:PDB:NREP 1 BL:PDB:REP 3->128|3fhmA|1e-18|38.9|126/136| RP:PDB:NREP 1 RP:PDB:REP 1->132|3ctuB|6e-16|14.1|128/146| RP:PFM:NREP 1 RP:PFM:REP 16->124|PF00478|2e-04|34.3|99/459|IMPDH| HM:PFM:NREP 2 HM:PFM:REP 4->61|PF00571|1.4e-12|27.8|54/57|CBS| HM:PFM:REP 72->123|PF00571|2.6e-17|40.4|52/57|CBS| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00478|IPR001093| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00478|IPR001093| RP:SCP:NREP 1 RP:SCP:REP 13->131|2yziA1|4e-23|25.4|118/132|d.37.1.1| HM:SCP:REP 1->66|1y5hA2|3.1e-09|36.5|63/0|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 62->145|2nycA1|3.1e-17|38.1|84/0|d.37.1.1|2/2|CBS-domain| OP:NHOMO 607 OP:NHOMOORG 376 OP:PATTERN 32-3-14433333332116238611--1--1-1-12121111-12-312-11-3111-------2--1 -11------------1111-11--1111111111111111111--1----------------1--211--------------1---1--------------1---2-231----------------1------------11---13-11-1--21--------111--111------------11-11-1--211111111111111111-2211111122-1--------21-------------------------------------------------------------------------------------------1-111111111-1-1---1----11--1--2-11211-1111----------1112-----223322121111111-11111-11-12211111232-12214351114422-113113232132--------222-1431------------------------------211211111133333232222333333331234326221111121233223251124111111-------112422--------12-111------------1-12-1-------------------------------------------------------------3----------------------------------------------------------------------------------------------------111---------------------1111111-----3233111121111-111------------------------2211111111--------111111-----------------------------------------1-111-2- ----21-------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---3---1-3214-111221-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 138 STR:RPRED 95.8 SQ:SECSTR TTHHHHEEEGHHGGcccEETTccHHHHHHHHTTccccEEEEcTTccEEEEEcHHHHHHHHHTHccHHHHTccGGGcccccccccTTccHHHHHHHHHHcccEEEEEcTTccEEEEEEHHHHHHHHHHHHTTcTTccTT###### DISOP:02AL 144-145| PSIPRED ccHHHHHcccccccEEEcccccHHHHHHHHHHccccEEEEEccccEEEEEEEHHHHHHHHHHcccccccccHHHHcccccEEEcccccHHHHHHHHHHccccEEEEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHcccc //