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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57425.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  155/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:424 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->406 3c48A PDBj 7e-17 31.0 %
:RPS:PDB   1->412 3c48A PDBj 2e-30 20.6 %
:RPS:SCOP  1->407 2bisA1  c.87.1.8 * 1e-27 22.2 %
:HMM:SCOP  2->413 2bisA1 c.87.1.8 * 2.9e-69 28.5 %
:RPS:PFM   115->202 PF11997 * DUF3492 9e-05 33.3 %
:RPS:PFM   238->354 PF00534 * Glycos_transf_1 3e-10 35.3 %
:HMM:PFM   228->381 PF00534 * Glycos_transf_1 2.6e-24 32.7 153/172  
:HMM:PFM   14->40 PF08323 * Glyco_transf_5 0.00085 40.7 27/241  
:BLT:SWISS 2->419 Y496_MYCBO 7e-12 27.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57425.1 GT:GENE BAD57425.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2746861..2748135) GB:FROM 2746861 GB:TO 2748135 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57425.1 LENGTH 424 SQ:AASEQ MRIALLSYRSKTHCGGQGVYVRKLSAGLAELGHEVEVFSGQPYPEDLDPRVRLTEVPSLDLYRESDPFRTPHPREIRDRIDLLELATMWTAGFPEPRTFSLRAARLLRERAGDFDVVHDNQCLGSGLLDIAEFLPVVATVHHPITRDRAVDLAAAPWRRKPLVRRWYGFLGMQQRVARRIPDLVTVSSSSAADIVADFGVDPGRLNVVPLGVDTSLFAPRAAPRVAGRIVAVASADKPLKGVAHLLRACARLRVTHRIELQLVAKLEPEGPTEKLIAELGLSDIVTVRAGLSDADLADLLASAEIACIPSLYEGFSLPAVEAMASGTPLVVSRTGALPEVVGEPGVCADLITPGDADELAAALGALFDAPLRRQAMATACRERAVSVFSWESVAAQTARIYLRAIARTGSRALDNAQEVPRAHR GT:EXON 1|1-424:0| BL:SWS:NREP 1 BL:SWS:REP 2->419|Y496_MYCBO|7e-12|27.8|392/480| SEG 101->111|lraarllrera| SEG 187->192|ssssaa| SEG 291->303|lsdadladllasa| SEG 355->369|dadelaaalgalfda| BL:PDB:NREP 1 BL:PDB:REP 1->406|3c48A|7e-17|31.0|368/399| RP:PDB:NREP 1 RP:PDB:REP 1->412|3c48A|2e-30|20.6|384/399| RP:PFM:NREP 2 RP:PFM:REP 115->202|PF11997|9e-05|33.3|87/262|DUF3492| RP:PFM:REP 238->354|PF00534|3e-10|35.3|116/165|Glycos_transf_1| HM:PFM:NREP 2 HM:PFM:REP 228->381|PF00534|2.6e-24|32.7|153/172|Glycos_transf_1| HM:PFM:REP 14->40|PF08323|0.00085|40.7|27/241|Glyco_transf_5| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 1->407|2bisA1|1e-27|22.2|392/437|c.87.1.8| HM:SCP:REP 2->413|2bisA1|2.9e-69|28.5|410/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 270 OP:NHOMOORG 172 OP:PATTERN -------------------1-2-----11-----21-11111----11--112------1-------- ---212-1111-1-23311-12--321111112121413212221----1--111-1----11112-21121-----------------------1-----------1--------------------------1-68876111462-65111--11-----1-2122251---------------------------------------1--------1------------------------------------------------------------------------------------------------------------------------11-----1---1--11--111-1--2-11-------1----------1-1------------------------------1-----------------1-1-----1---------------11-----------------------------------------1111121----11111111-1123----------------1-------1-------------1-1--212-------11-----1--5----1-21-1-------------------------1------1-----------------------------1---------11---------------------1--------------------------1----------------------------------------------1---------------------------11111--1----------------------------------------------------11---------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 424 STR:RPRED 100.0 SQ:SECSTR cEEEEEcTTccTTcccHHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEEETTEEEEEEcccccccccGGGGGGGHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHTccEEEEccccHTccEEHHHHHHcccccHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHcccGGGEEEccccccTTTcccccHHHHHHTEEEEEccccGGGcHHHHHHHHHHHHHHcTccEEEEEEcccccHHHHHHHHTTcTTTEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHTTccEEEEccTTHHHHccccTTTEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccHHHHHHHHHH DISOP:02AL 406-424| PSIPRED cEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccEEEEEcccccEEcccccccccHHHHHccccHHHHccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccEEEEEcccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHccccHHcEEEEEccccHHHccccccccccccEEEEEEEccHHccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHccccccEEEEccccHHHHHHHHHcccEEEEccccccccHHHHHHHHccccEEEEcccccHHHHcccccEEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccc //