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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57426.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  110/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   70->186 1ezwA PDBj 8e-09 33.9 %
:RPS:PDB   1->256 1brlB PDBj 3e-31 13.1 %
:RPS:SCOP  1->280 1brlB  c.1.16.1 * 2e-33 12.6 %
:HMM:SCOP  1->279 1rhcA_ c.1.16.3 * 9.4e-56 33.6 %
:RPS:PFM   63->226 PF00296 * Bac_luciferase 4e-16 42.0 %
:HMM:PFM   1->234 PF00296 * Bac_luciferase 1e-62 42.5 214/307  
:BLT:SWISS 1->279 Y978_MYCBO e-117 69.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57426.1 GT:GENE BAD57426.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2748138..2748998) GB:FROM 2748138 GB:TO 2748998 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57426.1 LENGTH 286 SQ:AASEQ MRFGIVLFTSDRGITPAAAARAAEDFGFHSFYVPEHTHIPVKREAAHPQTGDASLPDDRYMRTLDPWVSLAMAAAVTERIELATAVALPVEHDAITLAKTIASLDHLSGGRVLLGAGFGWNTDELADHKVPAGKRRTVLREYLEGMRALWRDDEAEYHGEHLDFGPSWAWPKPVRRDVPVLIGAAGTEKTFRWIARSADGWITTPGETDITDRLALLRSIWTEAGRPGAPRVVALDIKPDAQRLAEWRAAGVTDVLYGLPDKPEEQVRAYLERLAAKLAVPAGEGN GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 1->279|Y978_MYCBO|e-117|69.5|279/282| SEG 17->23|aaaaraa| BL:PDB:NREP 1 BL:PDB:REP 70->186|1ezwA|8e-09|33.9|112/347| RP:PDB:NREP 1 RP:PDB:REP 1->256|1brlB|3e-31|13.1|237/319| RP:PFM:NREP 1 RP:PFM:REP 63->226|PF00296|4e-16|42.0|157/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 1->234|PF00296|1e-62|42.5|214/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 1->280|1brlB|2e-33|12.6|261/319|c.1.16.1| HM:SCP:REP 1->279|1rhcA_|9.4e-56|33.6|259/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 484 OP:NHOMOORG 119 OP:PATTERN -----------------------13-----3-----1--------------11-------------11 1---E--2111--1CLG77-7D11EM77777AAHIHACEF2B5H36--2---1-1-----446-5554233-----------2-----------------1--------------------------------------11----311------------------1121------------------------------------------------2---1-------------------------1--1---------------------------------------------------------------------------------------------------------------------------1211-----------------2---------------------1---3--------------1---------12------------------------------------------------4---1--11111111----331-------111--------1--1---1----------1-------------------------------------------51----------------------------------------------------------------------------------------------------------------11-1--------------------------------------------------------------------------------------1-----1111-1--1------------------------12----------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 97.9 SQ:SECSTR cEEEEEEcccccccccHHHHHHHHTTTccEEEEccccccccccTTcccGccHHHHccccccccccHHHHHHHHHHHccccEEEEEEEEcTTccHHHHHHHHHHHHHHHTccEEEEEEccccHHHHHHTTcccTTHHHHHHHHHHHHHHHHHHcEEcccccccccccEEcccccccTTccEEEEEEccHHHHHHHHHTTccEEEcTTccHHHHHHHHHHHHHHHHcccTTccccEEEEEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcc###### DISOP:02AL 280-286| PSIPRED cEEEEEEccccccHHHHHHHHHHHHccccEEEEEHHHHcccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccEEEccccEEEcccccccccEEEEEcccHHHHHHHHHHccEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccc //