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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57430.1
DDBJ      :             putative ferredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  25/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:75 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->63 1rofA PDBj 1e-06 35.0 %
:RPS:SCOP  2->67 1iqzA  d.58.1.4 * 4e-06 22.7 %
:HMM:SCOP  1->64 1sj1A_ d.58.1.4 * 1.2e-10 29.7 %
:RPS:PFM   1->63 PF06902 * DUF1271 2e-05 38.7 %
:HMM:PFM   1->64 PF06902 * DUF1271 1.2e-12 27.1 59/64  
:BLT:SWISS 1->63 FER2_STRGO 6e-07 39.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57430.1 GT:GENE BAD57430.1 GT:PRODUCT putative ferredoxin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2751787..2752014 GB:FROM 2751787 GB:TO 2752014 GB:DIRECTION + GB:PRODUCT putative ferredoxin GB:PROTEIN_ID BAD57430.1 LENGTH 75 SQ:AASEQ MRIVVDLDLCQGHAMCQAEAPEVFRVPKRGQVEILDPAPGPGLRAQVADAVRYCPTQALSLVEDEDDSTAKGTHR GT:EXON 1|1-75:0| BL:SWS:NREP 1 BL:SWS:REP 1->63|FER2_STRGO|6e-07|39.7|63/64| BL:PDB:NREP 1 BL:PDB:REP 1->63|1rofA|1e-06|35.0|60/60| RP:PFM:NREP 1 RP:PFM:REP 1->63|PF06902|2e-05|38.7|62/63|DUF1271| HM:PFM:NREP 1 HM:PFM:REP 1->64|PF06902|1.2e-12|27.1|59/64|DUF1271| RP:SCP:NREP 1 RP:SCP:REP 2->67|1iqzA|4e-06|22.7|66/81|d.58.1.4| HM:SCP:REP 1->64|1sj1A_|1.2e-10|29.7|64/66|d.58.1.4|1/1|4Fe-4S ferredoxins| OP:NHOMO 29 OP:NHOMOORG 25 OP:PATTERN -------------------------------------------------------------------- ---1----------11111-11--1111111112221112---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 63 STR:RPRED 84.0 SQ:SECSTR cccEEcTTTcccccccTTTcTTTccccccccccccccccccTTHHHHHHHHHHcTTccEEccc############ DISOP:02AL 63-75| PSIPRED cEEEEEHHHcccccccHHHcccEEEEccccEEEEccccccccHHHHHHHHHHHccccEEEEEEcccccccccccc //