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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57433.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  43/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:375 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:HMM:SCOP  22->107 1dihA1 c.2.1.3 * 3.5e-09 36.0 %
:RPS:PFM   21->67 PF01113 * DapB_N 4e-06 59.6 %
:HMM:PFM   21->107 PF01113 * DapB_N 9.4e-11 30.2 86/124  
:BLT:SWISS 10->63 DAPB_SYNY3 2e-06 46.3 %
:BLT:SWISS 18->219 DAPB_AZOVD 8e-04 23.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57433.1 GT:GENE BAD57433.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2753809..2754936 GB:FROM 2753809 GB:TO 2754936 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57433.1 LENGTH 375 SQ:AASEQ MSERARREPMADQPLRVIQWATGGVGRAAIEGVLDHPGLELVGAWVHSPDKDGRDLGTLVGRAETGVRASTDADALLALPADCVIYSPMTADTAVMRAILRSGKNLVTPLGWFHPAGKQRAGFDAVCREAGVTLHGTGIHPGGMTDKLPIVLSAFSGSITEVHAHEYSDIRTYGAPDVVREWMRFGATPAEATGGHMAAMLAGGYGQSVRMIADALGFALDDEVRTVHEIAVATAPIESPIGVIEPGLVAGQRIRWEGTVDGAAVVTVGVNWLMGEDDLDPPWRFGPAGERYDIRIVGDPGTHAVITGMHAHSTAAGLARHPGIVATAMHCVNSVPAVVAAEPGVRTYLDLPLLGGVAAGPVHRAAAPAGDHPHS GT:EXON 1|1-375:0| BL:SWS:NREP 2 BL:SWS:REP 10->63|DAPB_SYNY3|2e-06|46.3|54/275| BL:SWS:REP 18->219|DAPB_AZOVD|8e-04|23.9|197/100| SEG 72->82|dadallalpad| SEG 258->270|gtvdgaavvtvgv| SEG 355->370|ggvaagpvhraaapag| RP:PFM:NREP 1 RP:PFM:REP 21->67|PF01113|4e-06|59.6|47/123|DapB_N| HM:PFM:NREP 1 HM:PFM:REP 21->107|PF01113|9.4e-11|30.2|86/124|DapB_N| GO:PFM:NREP 3 GO:PFM GO:0008839|"GO:dihydrodipicolinate reductase activity"|PF01113|IPR000846| GO:PFM GO:0009089|"GO:lysine biosynthetic process via diaminopimelate"|PF01113|IPR000846| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01113|IPR000846| HM:SCP:REP 22->107|1dihA1|3.5e-09|36.0|86/163|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 149 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- --------------3AA22-2E--86222223BBCB4221-2-5------------------11--------------------------------------------1------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------1-----11--111--------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 46 STR:RPRED 12.3 SQ:SECSTR #########cccccEEEEEEcccHHHHHHHHHHHTcTTEEEEEEEcccHHHHHHH################################################################################################################################################################################################################################################################################################################################ DISOP:02AL 1-12, 365-375| PSIPRED ccccccccccccccccEEEEcccHHHHHHHHHHHcccccEEEEEEEccHHHccHHHHHHHccccccEEEEccHHHHHcccccEEEEccccccHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHcEEEEEEEEEEEEEccccccHHHHHHHHcccccHHHccccccccccccccHHHHHHHHHHccccccccEEEEEEEEEcccEEEcccEEEcccEEEEEEEEEEEEEccEEEEEEEEEEEEccHHcccccccccccccEEEEEEEcccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEHHHccccccccccccccccccccccccc //