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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57441.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  23/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:471 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   98->323 3e1tA PDBj 5e-08 33.6 %
:RPS:PDB   39->333 3c96A PDBj 2e-10 16.7 %
:RPS:SCOP  145->333 3c96A1  c.3.1.2 * 8e-07 16.4 %
:HMM:SCOP  10->365 1k0iA1 c.3.1.2 * 9.1e-41 36.4 %
:HMM:PFM   11->324 PF01494 * FAD_binding_3 1.7e-16 26.3 308/356  
:HMM:PFM   324->374 PF07007 * DUF1311 0.00085 29.8 47/95  
:BLT:SWISS 88->177 GGR_PYRFU 4e-04 29.1 %
:BLT:SWISS 290->320 GGR_UNCMA 5e-04 51.6 %
:BLT:SWISS 364->437 RPOA_PRRSR 6e-04 35.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57441.1 GT:GENE BAD57441.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2764563..2765978) GB:FROM 2764563 GB:TO 2765978 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57441.1 LENGTH 471 SQ:AASEQ MSGTPATGVEETEVVVVGARCAGSAAATAFARAGRAVVLLDAARFPSDTLSTHLLWPAGVAELRRLGALDRVLALGAPPLRTAFAAGAGLAVRSRFEPVDGIDYALCVRRTGLDSALVATATAAGAQLREGARVAELVWERGRCVGVRYAAGNGLRELRAALVVGADGRRSTVARLACAGEPWLARASGRDCFYAYWRDVHHDRRAIAAQWREGTDLGTAFPCDDGLLLSLVQPAASTERLGPGTAEQRYTAAIARIPGLAARLAGCERVGRVRSATGLVSYFRRSAGPGWALPGDAGHFKDPVTAQGIRDALRYGRLLGEQAAPMLDDTHALDAAVTAWERERVAECLEIFQWTNRLARGTAMNSLETELYRAAQADPALASAVTAIFSRTRRPTDILGPARGAALTVSALRRAFPGIGPVLGDLAAEARDAVADWWQARALAHHRFGAQSSALAAATPPSAVCSGDRHG GT:EXON 1|1-471:0| BL:SWS:NREP 3 BL:SWS:REP 88->177|GGR_PYRFU|4e-04|29.1|86/393| BL:SWS:REP 290->320|GGR_UNCMA|5e-04|51.6|31/392| BL:SWS:REP 364->437|RPOA_PRRSR|6e-04|35.6|73/100| SEG 7->38|tgveetevvvvgarcagsaaatafaragravv| SEG 116->126|alvatataaga| SEG 450->463|aqssalaaatppsa| BL:PDB:NREP 1 BL:PDB:REP 98->323|3e1tA|5e-08|33.6|214/437| RP:PDB:NREP 1 RP:PDB:REP 39->333|3c96A|2e-10|16.7|293/381| HM:PFM:NREP 2 HM:PFM:REP 11->324|PF01494|1.7e-16|26.3|308/356|FAD_binding_3| HM:PFM:REP 324->374|PF07007|0.00085|29.8|47/95|DUF1311| RP:SCP:NREP 1 RP:SCP:REP 145->333|3c96A1|8e-07|16.4|177/269|c.3.1.2| HM:SCP:REP 10->365|1k0iA1|9.1e-41|36.4|250/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 30 OP:NHOMOORG 23 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------2111-321----------------21--2-11--------------2--------------------------------------------------------------1-------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------11---------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 411 STR:RPRED 87.3 SQ:SECSTR ######################################EEEccccccccccEEEEcHHHHHHHHHTTcHHHHHHHcEEEcEEEEEcTTccEEEEEEcGGGGTccEEEEEHHHHHHHHHHHHHHHHccEEEcEEEEEEEEETTEEEEEEEETTccEEEEEEcEEEEcccTTcHHHHHHcTTcccTTccEEEEEEcTTccEEEEEEccHHHHTTTcEEEEEEEEEEHHHHccccccccTTccccHHHHHHHHTTcccTTccHHHTcHHHTccEEEEEEEEEcccccccccTTEEEcTHHHHcccccTTcTHHHHHHHHHHHHHHHHHcccHHHHHGGGGGGHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccTTTcccccccHHHHHHHHHHTTcccccccGGGGGcHHHHHHHHHHHHHHHHH###################### DISOP:02AL 1-9, 467-471| PSIPRED cccccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccccEEcHHHHHHHHHcccHHHHHHccccEEEEEEEEccccEEEccccccccccEEEEEEHHHHHHHHHHHHHHcccEEEEccEEEEEEEccccEEEEEEEccccEEEEEEEEEEEEccccHHHHHHHcccccccccccEEEEEEEEEccccccccEEEEEEEcccEEEEEEEccccEEEEEEEccccccccccccHHHHHHHHHHHccHHHHHHcccccccHHEEEccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHccccccccccHHHccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHccccccHHHccccccc //