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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57445.1
DDBJ      :             putative alcohol dehydrogenase
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  413/915 : Eukaryota  168/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1
:364 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->363 1f8fA PDBj 1e-48 34.7 %
:RPS:PDB   2->364 1a71A PDBj 1e-33 21.3 %
:RPS:SCOP  2->180 1f8fA1  b.35.1.2 * 2e-24 30.6 %
:RPS:SCOP  160->336 1vj0A2  c.2.1.1 * 2e-09 17.2 %
:HMM:SCOP  1->194 1hetA1 b.35.1.2 * 2.9e-59 44.6 %
:HMM:SCOP  159->330 1m6hA2 c.2.1.1 * 7.9e-44 34.9 %
:HMM:PFM   197->322 PF00107 * ADH_zinc_N 8.4e-29 35.2 125/130  
:HMM:PFM   29->113 PF08240 * ADH_N 7.3e-26 41.2 85/109  
:BLT:SWISS 7->363 XYLB_PSEPU 5e-52 37.1 %
:PROS 61->75|PS00059|ADH_ZINC
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57445.1 GT:GENE BAD57445.1 GT:PRODUCT putative alcohol dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2767931..2769025 GB:FROM 2767931 GB:TO 2769025 GB:DIRECTION + GB:PRODUCT putative alcohol dehydrogenase GB:PROTEIN_ID BAD57445.1 LENGTH 364 SQ:AASEQ MMRTTTAALSRDPRGPFQLEQVRLDAPRPDEILVRVLASGICHTDLVSRAAGAADRPVLLGHEGAGVVEEVGGAVTSVRPGDHVVLTFRHCGACRNCATGRPAYCRKATALNTFGRRADGTPRVTVDGAPVLDGFFGQSSLAGYALATADNTVVIDPSVDPVVAAPLGCGFQTGAGAVLNLLRPEADSWLVVYGAGAVGLAALLAARTLDGVRTVVVETSAQRRALALELGATAALDPADGDTTARVRELTGGGADHALEATGIPTVLADAVRALGVGGTVAAVGLGTGAPPLDMRDIVVHGKSIRGCLEGDSVPTEFVPRLLELYRSGRLPLDRLVSVYPSAEIETALADQRAGTIVKPVLRW GT:EXON 1|1-364:0| BL:SWS:NREP 1 BL:SWS:REP 7->363|XYLB_PSEPU|5e-52|37.1|356/366| PROS 61->75|PS00059|ADH_ZINC|PDOC00058| SEG 58->75|vllghegagvveevggav| SEG 190->206|lvvygagavglaallaa| SEG 225->236|alalelgataal| SEG 271->290|avralgvggtvaavglgtga| BL:PDB:NREP 1 BL:PDB:REP 2->363|1f8fA|1e-48|34.7|357/362| RP:PDB:NREP 1 RP:PDB:REP 2->364|1a71A|1e-33|21.3|362/374| HM:PFM:NREP 2 HM:PFM:REP 197->322|PF00107|8.4e-29|35.2|125/130|ADH_zinc_N| HM:PFM:REP 29->113|PF08240|7.3e-26|41.2|85/109|ADH_N| RP:SCP:NREP 2 RP:SCP:REP 2->180|1f8fA1|2e-24|30.6|173/188|b.35.1.2| RP:SCP:REP 160->336|1vj0A2|2e-09|17.2|174/182|c.2.1.1| HM:SCP:REP 1->194|1hetA1|2.9e-59|44.6|193/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 159->330|1m6hA2|7.9e-44|34.9|172/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1220 OP:NHOMOORG 595 OP:PATTERN ------1111111111-1--111--------------------------------------------- ----52-312311146533-341169323334456568CD-5122-13----3122-1---15-2263352-----------2--------------------------------------------------------------51111111--11---11-11-11111--------------------11-----------11--1-1--1---1-1--1---------1---------1----11-111--1----2---111111111--------------11------------------------------------------------------------------------------------1--2222-----112241123112222222221111---------113-133156522434111413212222313111111111111--11------------------------------25321111122221221111122311111111112332--1121-111211112211----11--1111121221-1-------------------------1-11-1-------------------------11111122115211111112211111221111---1---------1111-111111111111-111111111111111111132211111111-1111111-1--13-1----1--111111111111---1----------11211111-1--111----111-2-311111112121111121111121--1-1----1222-----111111222222111--------------------------------------------------------------- ----112-----111543252334443111111111221212112211132472-11322221-11112-11--211-111111--11-11141-11--131111--111157478231-2152671H1Fb9-B7D333342253322-224382A25B1221222-113--3-111129111-147CK1971231212 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 364 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEEcccTTcccEEEEEEEccccTTEEEEEEEEEEccHHHHHHHTcccccccccccccEEEEEEEEcTTcccccTTcEEEEccccccccHHHHcccccccTTccccccccccTTccccEEETTEEEccccTTTcccccEEEEEGGGEEEccTTccHHHHGGGGTHHHHHHHHHHTTTcccTTcEEEEEcccHHHHHHHHHHHHTTccEEEEEcccGGGHHHHHHHTccEEEcGGGccccHHHHHHTTccccEEEEccccHHHHHHHHccTTTcEEEEcccccTTccccccTHHHHTTcEEEEccGGGccHHHHHHHHHHHHHTTccccGGGEEEEEGGGHHHHHHHHHTTcccEEEEEc DISOP:02AL 1-3| PSIPRED ccHHHEEEEEEcccccEEEEEEEcccccccEEEEEEEEEEEEccEEEEEccccccccEEEccccEEEEEEEcccccccccccEEEEccccccccHHHccccccccccccccccccccccccccEEEccccccccEEccccEEEEEEEcHHHEEEccccccHHHHHHHccHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHccEEEEEEEEcccccHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHcccEEEEEEEc //