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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57447.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  22/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:265 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->265 3giwA PDBj 2e-38 43.5 %
:RPS:PDB   16->236 3c3yA PDBj 4e-06 10.0 %
:RPS:SCOP  60->233 1m6yA2  c.66.1.23 * 1e-04 17.0 %
:HMM:SCOP  14->261 1rjdA_ c.66.1.37 * 3.2e-43 25.6 %
:RPS:PFM   7->265 PF04672 * DUF574 2e-57 51.8 %
:HMM:PFM   6->265 PF04672 * DUF574 5e-94 47.5 259/268  
:BLT:SWISS 84->136 METC_BACSU 8e-04 34.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57447.1 GT:GENE BAD57447.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2769530..2770327) GB:FROM 2769530 GB:TO 2770327 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57447.1 LENGTH 265 SQ:AASEQ MPDDHAPLIRTDIPHSARIWNYWMGGKDYYEIDRVAGDAGIEVDPDITTMAVQSRQFLIRAVRFLASEIGIRQFLDIGTGLPTMQNTHEVAQSVAPESKVVYVDNDPLVLTHARALLTSTTPEGVTTYVDCDFHDPEQIIADARNVLNLNEPVGVMFMGVLGHAKTYDELRRIVDTVLAAVPSGSYLVMWDGTDDSAEYVALCKNYAETGGVPYVPRPQEQIRAVFDGLEMVEPGFVSITQWRPDATQVGEIRPISAYGAVARKP GT:EXON 1|1-265:0| BL:SWS:NREP 1 BL:SWS:REP 84->136|METC_BACSU|8e-04|34.0|53/390| BL:PDB:NREP 1 BL:PDB:REP 9->265|3giwA|2e-38|43.5|248/254| RP:PDB:NREP 1 RP:PDB:REP 16->236|3c3yA|4e-06|10.0|211/225| RP:PFM:NREP 1 RP:PFM:REP 7->265|PF04672|2e-57|51.8|255/264|DUF574| HM:PFM:NREP 1 HM:PFM:REP 6->265|PF04672|5e-94|47.5|259/268|DUF574| RP:SCP:NREP 1 RP:SCP:REP 60->233|1m6yA2|1e-04|17.0|171/192|c.66.1.23| HM:SCP:REP 14->261|1rjdA_|3.2e-43|25.6|242/0|c.66.1.37|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 159 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ----H-------------------------------4----PCH----------------65--45JACA3------------------------------------------------------------------1111---1-----------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 257 STR:RPRED 97.0 SQ:SECSTR ########ccTTccHcHHHHHHHHHHHHTGGGccHHHHHHHHHHTTcTTGGGcccHHHHHHHHHHHHHTTccEEEEEccTccTcHHHHHHHHHccTTcEEEEEEccHHHHHHHHHHHHHTTcGGGEEEEEccHHHHHHHHHHcTTcTTccEEEEEEEEEEcccGGGHHHHHHHHHHHEEHEEEEEEEEcTTGGGGGGccGGGccGGGHHHHHHHHHHHHHHcTTEEEEEEccTTcEEEEEEEEETTTTTTTccGGGcEEEEEEcc DISOP:02AL 1-5, 8-9| PSIPRED cccccccccccccccHHHHHHHHcccEEcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHccccEEEEEcccHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHcccccccccHHHHHHHHcccEEEcccEEEccccccccccccccccHHHHccccccc //