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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57449.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:285 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   3->90 2csfA PDBj 5e-08 8.0 %
:RPS:SCOP  17->116 1s4kA  a.35.1.6 * 5e-07 20.8 %
:HMM:SCOP  9->70 1y9qA1 a.35.1.8 * 1.7e-05 29.0 %
:HMM:PFM   21->74 PF01381 * HTH_3 6.3e-06 24.5 53/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57449.1 GT:GENE BAD57449.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2771120..2771977 GB:FROM 2771120 GB:TO 2771977 GB:DIRECTION + GB:PRODUCT putative DNA-binding protein GB:PROTEIN_ID BAD57449.1 LENGTH 285 SQ:AASEQ MQQAVAERGPTVLRIALGGQLRKLRESRNITREAAGDAIRGSHAKISRLELGRTGFKERDIRDLLTLYGVVDPAERESFLDLARRANEPGWWHRYSDLLPQWFGQYLGLEQAAWKIRTYEAHLVPGLLQTPDYARAVLALGSDDADTDRRVDVRRRRQEILRRPEPPIVWAVLDEAALHRPVGGVQVHRAQIEHLIELAALPNVTLQVLPYSAGEHAAAGASFSILRFAEAELPDVVYLEHLTSALYLDRTQDLALYRSVMDRLSVQALAPDKSVDWLKNFAAGL GT:EXON 1|1-285:0| SEG 143->163|ddadtdrrvdvrrrrqeilrr| RP:PDB:NREP 1 RP:PDB:REP 3->90|2csfA|5e-08|8.0|88/101| HM:PFM:NREP 1 HM:PFM:REP 21->74|PF01381|6.3e-06|24.5|53/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 17->116|1s4kA|5e-07|20.8|96/120|a.35.1.6| HM:SCP:REP 9->70|1y9qA1|1.7e-05|29.0|62/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 191 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----5-------------------------------9----557----------------GI--K9RMLED---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 130 STR:RPRED 45.6 SQ:SECSTR HHcccccTTcccccTHHHHHHHHHHHHHTccHHHHHHHHTccHHHHHHHHHHcccccTTcHHHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHHHGGGTTccHHHHHHHHHHHHHHHHHHHHHHHH########################################################################################################################################################### DISOP:02AL 1-10| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcHHHEEEcccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHc //