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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57453.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:287 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   122->165 3c9bA PDBj 3e-04 40.9 %
:HMM:SCOP  1->60 1y9qA1 a.35.1.8 * 1.2e-07 40.0 %
:HMM:PFM   10->60 PF01381 * HTH_3 2.9e-07 35.3 51/55  
:HMM:PFM   137->256 PF10620 * MdcG 0.00054 24.1 87/213  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57453.1 GT:GENE BAD57453.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2774442..2775305 GB:FROM 2774442 GB:TO 2775305 GB:DIRECTION + GB:PRODUCT putative DNA-binding protein GB:PROTEIN_ID BAD57453.1 LENGTH 287 SQ:AASEQ MLRMILGGRLRRLRESRGISREDAGEAIRGSHSKISRLELGRTGFRERDLVDLLTLYGVEDETERAEFLMLARQANASGWWHHDSDWLPKWFDTYLGLEQGARLIRCYEPRAVPELLQTADYARALLTLAHPDEPADAIERRVALRMRRQHILDRTDPPQVWLIVEEAALRRPIGGSAVWRDQLDRLLEALDRPNITLQVLPDHVGGPALADGAFTMLRFTEADLPDIVYLQQLTGALYLDKESDLSAYRAVANMLSVHASPPQYTKGLLEALRLRQPATVDEPLGR GT:EXON 1|1-287:0| SEG 1->22|mlrmilggrlrrlresrgisre| RP:PDB:NREP 1 RP:PDB:REP 122->165|3c9bA|3e-04|40.9|44/195| HM:PFM:NREP 2 HM:PFM:REP 10->60|PF01381|2.9e-07|35.3|51/55|HTH_3| HM:PFM:REP 137->256|PF10620|0.00054|24.1|87/213|MdcG| HM:SCP:REP 1->60|1y9qA1|1.2e-07|40.0|60/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 206 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----6-------------------------------C----557----------------IK--L9PPPGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 47 STR:RPRED 16.4 SQ:SECSTR ########################################################################################################################ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHH######################################################################################################################## DISOP:02AL 73-78, 281-283| PSIPRED ccHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccEEEEEEccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccHHHcccccc //