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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57454.1
DDBJ      :             putative acyl-CoA synthetase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  701/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
d.129.3e.23.1
:692 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   237->672 3cw9A PDBj 2e-28 29.0 %
:RPS:PDB   2->133 3cnwB PDBj 4e-08 13.2 %
:RPS:PDB   198->672 3cw9A PDBj 4e-49 25.3 %
:RPS:SCOP  2->132 2rerA1  d.129.3.6 * 4e-10 16.8 %
:RPS:SCOP  198->672 1t5dX  e.23.1.1 * 1e-49 24.4 %
:HMM:SCOP  1->138 2d4rA1 d.129.3.6 * 4.4e-10 25.2 %
:HMM:SCOP  165->679 1pg4A_ e.23.1.1 * 1.7e-123 35.6 %
:RPS:PFM   211->606 PF00501 * AMP-binding 2e-33 33.8 %
:HMM:PFM   211->607 PF00501 * AMP-binding 3.7e-74 27.8 395/418  
:HMM:PFM   2->131 PF10604 * Polyketide_cyc2 1.3e-07 26.0 127/139  
:BLT:SWISS 237->676 YDAB_BACSU 5e-42 32.8 %
:PROS 339->350|PS00455|AMP_BINDING
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57454.1 GT:GENE BAD57454.1 GT:PRODUCT putative acyl-CoA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2775313..2777391) GB:FROM 2775313 GB:TO 2777391 GB:DIRECTION - GB:PRODUCT putative acyl-CoA synthetase GB:PROTEIN_ID BAD57454.1 LENGTH 692 SQ:AASEQ MTADLPISRQAVWDLLREPQTYPRVFPGVGACDPLESVGGHTMLRLRVGTAAAGIRLHTVQLRVGRWYESLELVCPALGSFASVRLLGDERRTRVTVTLFAPGRMHPAIERSTNAAIAAWTERGLRRIADLVRGTPTSTVVNGENSPVRRRAEVLRQMVGTGVVPTTRPDIGLRQLRMLSEWGFNMAGGYAAGAVFDPARIALVDEHGTATFADVHERTTAIAGALGELGLRAGDAVGLLARNHRGMVETIVAAGKLGVDVALLNTGLPARRIEEVVQRDKLTALFVDDEFDHLVQYLHADLPRYATEATAVPGRITLDDLAGMGHTRFRKPTRPGKLIVLTSGTSGTPKGARRPHPKGFSTVAALLSRIPLGMDETMLIPAPLFHTWGLAALQLSTALRSTVVLPRHFDAEQCLRLIADHRVSTLIAVPIMVHRILELPAHVRARYDTSSLRVVASCGAPLAAHTVLGFMDAYGEILYNVYGSTEVSWATIADPADLLAAPTTAGTPPLGTKVAVLGPDHRPVPVGATGHVFVSNHMLFDGYVNSAPPDEADGMLDTGDLGYLDATGRLFIAGRDDEMIISGGENVFPRPVEEALAYLPQVREVAVVGVPDPEYGQRLAAFVVKREGTGLDSDMVRTYIRNRLSRFSVPRDVTFLSALPRGDTGKILKRLLTGEAGGEDLHPIIGTIAPNP GT:EXON 1|1-692:0| BL:SWS:NREP 1 BL:SWS:REP 237->676|YDAB_BACSU|5e-42|32.8|433/503| PROS 339->350|PS00455|AMP_BINDING|PDOC00427| SEG 221->236|aiagalgelglragda| SEG 493->512|adpadllaapttagtpplgt| BL:PDB:NREP 1 BL:PDB:REP 237->672|3cw9A|2e-28|29.0|421/503| RP:PDB:NREP 2 RP:PDB:REP 2->133|3cnwB|4e-08|13.2|129/137| RP:PDB:REP 198->672|3cw9A|4e-49|25.3|474/503| RP:PFM:NREP 1 RP:PFM:REP 211->606|PF00501|2e-33|33.8|393/405|AMP-binding| HM:PFM:NREP 2 HM:PFM:REP 211->607|PF00501|3.7e-74|27.8|395/418|AMP-binding| HM:PFM:REP 2->131|PF10604|1.3e-07|26.0|127/139|Polyketide_cyc2| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 2 RP:SCP:REP 2->132|2rerA1|4e-10|16.8|131/155|d.129.3.6| RP:SCP:REP 198->672|1t5dX|1e-49|24.4|471/502|e.23.1.1| HM:SCP:REP 1->138|2d4rA1|4.4e-10|25.2|135/0|d.129.3.6|1/1|Bet v1-like| HM:SCP:REP 165->679|1pg4A_|1.7e-123|35.6|514/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 8014 OP:NHOMOORG 941 OP:PATTERN 44-1--9HHGIIHGFA1163642HA33321573231--323217656944333----1---254---2 2477V555555C4BVrULL-Kc66dgKKKKKKhgkghz**2ZAa4233154-949655--KHI2SJcOGS6-111-11-497D113213332-2--1--113112A-22---------1-----132332313433BBBEE222R785948A922332224123225F4S3-2211--3-11-63566--1D8KCCDCDFBFADBFEGB87DDBIDDGAJDCB45222222Q4255555555555555533351-1-11-1----11111121223111---1---------------------------------------11---21111311-1-F-22------61-81-7-B93251--B31111---611JAAG-111153WPb646YOWQP34443343445-CBGDBLCC9FK-766A67776B77DH696AAH6A77B9E22222222B2112985-----------------------------2FJcG-6IH9GGLMPOMIHIIFEDGOQRRQCMTEYWimZ36IIBBDCEDTBGLUP33B1111942222222344D892jKC5666566555-3643624445675UI98-111-11111--11-1----111241156-663747536444458644457464577--12872------B3A6443777B7CC876-678776878878877677576854JH38577798889778778624355651-333333233232---3-1-21456346G2A222111-111-211266776477A9C3DEEENLJG9FGHC8FAI32222323213446455556326645444443332222--2---1111--------21------------------------------------16- ----8D5-----659IJECLCDCKILPCCAA8BABABE7FBEEAAAA6BCDFGJA9C66B9AA-222221111211111122222212-EF6J9962211447DFC1686H49375B4213362IB374IqA18AD3443A55942641-A41I2663JDCJBW8KDMCQF9BGC2245c74674FKGpBUQ44F8D9A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 647 STR:RPRED 93.5 SQ:SECSTR #EEEEcccHHHHHHHHccTTcHHHHcTTcccEEEEGGGTEEEEccTTcccEEEEEEEEETTTTEEEEEEEccccEEEEEEEEEEEEcccTTcEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHTH###################################TcEEccccccccccccHHHHHHHHHHHHTTcEEEEEGGGTEEEHHHHHHHHHHHHHHHHTTccTTcEEEEEccccHHHHHHHHHHHHHTcEEEEEcTTccHHHHHHHHHHTTccEEEEcccHHHHHHHHHTTcccEEEEHHHHEETTEEcccccccccccccTTcEETEEEEEcccccccEEEEEEGGGHHHHHHHHHHTccccTTcEEEEcccTTcHHHHTTHHHHHHTTcEEEEcccccHHHHHHHHHHHTccEEEEcHHHHHHHHHHHHHTcTTcccTTccEEEEccccccHHHHHHHHHHcccEEEEEEEETTTEEEEEEEccccccEEcccTTccEEEEcTTccTTccccTTccEEEEEEccTTcccccTTcHHHHHHTTEEEEEEEEEEcTTccEEEEEEccccEEETTEEEcHHHHHHHHTTcTTEEEEEEEEEEETTTEEEEEEEEEEcTTcccHHHHHHHHHHccccGGGcccEEEEcccccccTTccccHHHHHHHHHHHHTcT######### DISOP:02AL 1-3, 686-692| PSIPRED ccccccccHHHHHHHHHHHcccHHHcccccccccHHHHccccHHHHHcccccccccccHHHHHHHHHcccHHHHccccccccccccccccHHccccEEEEEcccEEEEEEEcHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHccEEEEEcccccccccHHHHHccccccccccccccEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEEccHHHHHHHHHccHHHHcccccccEEEEEEccccccHHHHHHHHHHcccEEEEccccHHHccEEEEccccHHHccccccEEccccEEEEEcccccccccccEEEEEEcccHHHHHHcccHHHHHHcccEEEccEEEEccccEEEEEEccccEEEEccEEEcHHHHHHHHHHcccEEEEEEEcccccccccEEEEEEEEcccccccHHHHHHHHHHHccccccccEEEEEEcccccccccHHHHHHHHHHHccccccHHccccccc //