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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57456.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  26/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:158 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   18->147 2cfsA PDBj 2e-05 10.1 %
:RPS:SCOP  1->106 1u7oA  c.108.1.17 * 4e-11 28.3 %
:HMM:SCOP  1->106 1u7pA_ c.108.1.17 * 1.7e-12 24.5 %
:HMM:PFM   11->37 PF01596 * Methyltransf_3 0.00056 37.0 27/205  
:BLT:SWISS 18->143 HGD_PSEF5 2e-04 39.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57456.1 GT:GENE BAD57456.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2779518..2779994 GB:FROM 2779518 GB:TO 2779994 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57456.1 LENGTH 158 SQ:AASEQ MRPALRCLVWELDNTLWDGVVCDATSTAPRPAALRTLRVLNERGIWHAAASRSDRGLTLERLYRHGVYEMFSALEIGWGRKSASIVRIARTLGLSLDTIAYIDDEPVERAEVSRALPQVRCYAARNVDVLTALPDFRPVRRSGPHPTPPLGFDRIPAV GT:EXON 1|1-158:0| BL:SWS:NREP 1 BL:SWS:REP 18->143|HGD_PSEF5|2e-04|39.8|98/434| RP:PDB:NREP 1 RP:PDB:REP 18->147|2cfsA|2e-05|10.1|129/291| HM:PFM:NREP 1 HM:PFM:REP 11->37|PF01596|0.00056|37.0|27/205|Methyltransf_3| RP:SCP:NREP 1 RP:SCP:REP 1->106|1u7oA|4e-11|28.3|106/162|c.108.1.17| HM:SCP:REP 1->106|1u7pA_|1.7e-12|24.5|106/0|c.108.1.17|1/1|HAD-like| OP:NHOMO 31 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- --3-1---------1---------------------1-11------------------------2-----------------------1----------------1--------------------------------------1------------------------1-------------------------------------------1----------------------------------------------------------------------------------------------------------------------------2---------1----------------------------------------------------------------------------------------------------11111111---------------------------------------------------1----------------------------------------------------------1--------------1---------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 130 STR:RPRED 82.3 SQ:SECSTR #################EEEEEcccTTccHHHHHHHHHHHTcTTcEEEEEcccccEEEcTTccEHHHHHHHTcccEEccTcTHHHHHHTTcccccGGGEEEEEccTTTHHHHHHHTTcEEEEETTccccHHHHHHHHHTTcGGGccc########### DISOP:02AL 157-159| PSIPRED cccccEEEEEEccccccccEEEcccccccHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHcccHHHEEEEcccHHHHHHHHHHccccEEEEcccHHHHHcccccccHHcccccccccccccccccc //