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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57459.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  319/915 : Eukaryota  158/199 : Viruses  1/175   --->[See Alignment]
c.3.1d.16.1
:523 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->522 2jbvB PDBj 7e-64 36.2 %
:RPS:PDB   20->522 1cf3A PDBj 3e-64 25.7 %
:RPS:SCOP  4->294 1ju2A1  c.3.1.2 * 4e-55 28.7 %
:RPS:SCOP  286->466 1cf3A2  d.16.1.1 * 1e-35 18.4 %
:RPS:SCOP  458->522 1b4vA1  c.3.1.2 * 5e-10 16.7 %
:HMM:SCOP  1->525 1gpeA1 c.3.1.2 * 8.9e-77 35.2 %
:RPS:PFM   20->290 PF00732 * GMC_oxred_N 1e-65 50.9 %
:RPS:PFM   379->498 PF05199 * GMC_oxred_C 6e-22 51.7 %
:HMM:PFM   4->292 PF00732 * GMC_oxred_N 1.9e-90 41.9 289/298  
:HMM:PFM   377->516 PF05199 * GMC_oxred_C 5.2e-38 42.8 138/145  
:BLT:SWISS 20->522 Y1310_MYCBO 0.0 64.4 %
:PROS 250->264|PS00624|GMC_OXRED_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57459.1 GT:GENE BAD57459.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2781393..2782964) GB:FROM 2781393 GB:TO 2782964 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57459.1 LENGTH 523 SQ:AASEQ MAADYVVVGTGSAGAVVAHRLSEDSGTRVVALEAGPPDKNKFAHIPAGFAKLFRSELDWDYLTEPQPALDGRRIYWPRGRMFGGSSSMNAMMWVRGFRADYDEWALLAGDEWGFAAAVEQYRRIENVQDAQYPDEGTGGPIHVEHQRSPRASTAAFLTAVQESGFPVEPPNRPQPKGFSQTMVTQHGGRRWSTADAYLKPAMRRPNLTVLPEALATRVLFEGTRAVGVEYRRGTETFVVRARREVVLCGGAINSPQLLMLSGVGDADELARHGIPVVRHAPEVGANLQDHLVAGLGYSVEGDSLFAAEKPKELLNYLLRHRGMLTSNVGEAYGFVRSRPDLEQPDLELVYAPAPFYYEGLLDPTEHGVILATVLLRPESRGRIALASADPTAKPVIDPRYLSDSDGVDRAAILSGLRTCARIAEAPALKAVLGDLIYPPKAPADLEAAIELALTGYSHTLYHPVGTCRMGTDPVSVVDPQLRVRGVAGLRVADASVMPLLVRGHTHAPSVFVGEQAARFLRAG GT:EXON 1|1-523:0| BL:SWS:NREP 1 BL:SWS:REP 20->522|Y1310_MYCBO|0.0|64.4|503/528| PROS 250->264|PS00624|GMC_OXRED_2|PDOC00543| SEG 6->18|vvvgtgsagavva| BL:PDB:NREP 1 BL:PDB:REP 20->522|2jbvB|7e-64|36.2|483/530| RP:PDB:NREP 1 RP:PDB:REP 20->522|1cf3A|3e-64|25.7|499/581| RP:PFM:NREP 2 RP:PFM:REP 20->290|PF00732|1e-65|50.9|271/296|GMC_oxred_N| RP:PFM:REP 379->498|PF05199|6e-22|51.7|118/140|GMC_oxred_C| HM:PFM:NREP 2 HM:PFM:REP 4->292|PF00732|1.9e-90|41.9|289/298|GMC_oxred_N| HM:PFM:REP 377->516|PF05199|5.2e-38|42.8|138/145|GMC_oxred_C| GO:PFM:NREP 3 GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF00732|IPR000172| GO:PFM GO:0050660|"GO:FAD binding"|PF00732|IPR000172| GO:PFM GO:0016614|"GO:oxidoreductase activity, acting on CH-OH group of donors"|PF05199|IPR007867| RP:SCP:NREP 3 RP:SCP:REP 4->294|1ju2A1|4e-55|28.7|268/351|c.3.1.2| RP:SCP:REP 286->466|1cf3A2|1e-35|18.4|179/196|d.16.1.1| RP:SCP:REP 458->522|1b4vA1|5e-10|16.7|65/366|c.3.1.2| HM:SCP:REP 1->525|1gpeA1|8.9e-77|35.2|338/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 2062 OP:NHOMOORG 479 OP:PATTERN --------------------------------------------1----------------------- ---1211----11133222-24--4822222254443156---11-1--1--2222-2--211-216312------------1-----------------------------------------------------------------2------------------1-2---------------1-----------------------------1---------------11-1111111111111111111--------------------------------------------------------------------------------------------------------------------------14331-------666--23324345485353453-213--423393-93314586577622-21237222253622222222222-1-1------------------------------12591-242-2845777444444489444436H495765-14222112232223912----11--------1-1----1---11----------------------2--------------------------------23-41221-1111111------11-11---1---------11----21111111111-111111-11111111-11-121111-1----------------2-----1----1-1111-1111--------------4123---------------111211122---44443333234222111-------------2-----112221111211------------------------------------------------------------------ ----111-211---2IIXGL9DDTRTJ6769884433454444555PGCFFKTOMKGJ84451----------2------2--------XiWIZMB32224892-1-1A25111113111111132111251-111111111111-11111111111129KG6C2HmGKMn1123111-----112257O492189984 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------3---- STR:NPRED 504 STR:RPRED 96.4 SQ:SECSTR ##################HHHTTcTTccEEEEEcccTTccHHHHcGGGTTTTTTcTTcccEEcccccTTTccccEEcccccTTGGGGTcccccccccHHHHHHHHHTTccTccHHHHHHHHHHHEEEccccHHHHcccccEEEccccccccccTHHHHHHHTTTccccccTcccccEEEcccccccTcccccHHHHHTGGGTTcTTEEEEEccEEEEEEEEccEEEEEEEEEETEEEEEEEEEEEEEcccTTTHHHHHHHTTcccHHHHGGGTcccccccccTTccccccEEccccEEEEEEEHHHHGGHHHHHHHHHHcHHHHHHHHHHTTccccHHHHHHHHHHHHHHHTTccEEEEEEEEcTTEEEEEEEEcccccccEEEEccccGGGcEEEEccTTccHHTcHHHHHHHHHHHHHHHHTcGGGGGTEEEEEEcGGGccTTcHHHHHHGGGccEEccccccTTccccGGTccccTTcccTTcccEEEccTTccccccccccHHHHHHHHHHHHHHHHH# DISOP:02AL 523-524| PSIPRED ccccEEEEcccHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHcccccccccccccccccccEEEEccccccccHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccEEccccccccHHHHHHHHHHHHcccccccccccccccEEEccccccccccccHHHHHHHHHHHcccEEEEEccEEEEEEEEccEEEEEEEEEccEEEEEEEccEEEEEccccccHHHHHHcccccHHHHHHcccccccccccHHHHHHcccEEEEEEEEccccccccccHHHHHHHHHccccccccccHHccEEEEcccccccccEEEEEEccccccccccccccccEEEEEEEcccccEEEEEEcccccccccEEcccccccccHHHHHHHHHHHHHHHHHHccccHHHcccccccccccccccHHHHHHHHHHHccccEEcccccccccccccEEccccEEcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHcc //