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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57461.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->74 1r8dB PDBj 5e-07 36.8 %
:RPS:PDB   7->107 3d70A PDBj 2e-11 15.8 %
:RPS:SCOP  7->90 1jbgA  a.6.1.3 * 2e-12 31.0 %
:HMM:SCOP  8->86 1q06A_ a.6.1.3 * 1.6e-14 34.2 %
:HMM:PFM   11->38 PF00376 * MerR 2.7e-11 50.0 28/38  
:HMM:PFM   50->90 PF09278 * MerR-DNA-bind 1.6e-06 36.6 41/65  
:BLT:SWISS 7->74 MTA_BACSU 1e-06 36.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57461.1 GT:GENE BAD57461.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2784892..2785587 GB:FROM 2784892 GB:TO 2785587 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57461.1 LENGTH 231 SQ:AASEQ MLTVVSRYSRSQLAELSGVPARTIRYYHSLGVLPKPGRAGKEAVYGDDHLARLRDIAEMQARGLRLDAIREVFDVQAQSGAPADWRAVLDPRYPGAGEQSAVLDDDQLTALLGDRRADILDELIAAEYLHRCEDGWRIPDQPMLKGALILYDLGTDITLSGALRKLIRTRLAELADEIVATFRDAAATSYGGEGIGIDHSRFRERFRAAAREVAGATLADEIDRAVRESEA GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 7->74|MTA_BACSU|1e-06|36.8|68/257| SEG 201->216|rfrerfraaarevaga| BL:PDB:NREP 1 BL:PDB:REP 7->74|1r8dB|5e-07|36.8|68/107| RP:PDB:NREP 1 RP:PDB:REP 7->107|3d70A|2e-11|15.8|101/276| HM:PFM:NREP 2 HM:PFM:REP 11->38|PF00376|2.7e-11|50.0|28/38|MerR| HM:PFM:REP 50->90|PF09278|1.6e-06|36.6|41/65|MerR-DNA-bind| RP:SCP:NREP 1 RP:SCP:REP 7->90|1jbgA|2e-12|31.0|84/106|a.6.1.3| HM:SCP:REP 8->86|1q06A_|1.6e-14|34.2|79/127|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 12 OP:NHOMOORG 11 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------1--1----------------------1-1-11121------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 122 STR:RPRED 52.8 SQ:SECSTR ######cEEHHHHHHHHTccHHHHHHHHHTTccccEEcTTccEEEcGGGGGHHHHHHHHHHHTccHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH######HHHHHHHHHHHHHHHHHHHHH################################################################################################# DISOP:02AL 1-5, 224-225, 227-231| PSIPRED cccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //