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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57462.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:231 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  6->82 2gfnA1 a.4.1.9 * 1.2e-09 33.8 %
:HMM:SCOP  83->228 1zk8A2 a.121.1.1 * 5.5e-06 27.5 %
:HMM:PFM   22->59 PF00440 * TetR_N 9.7e-10 42.1 38/47  
:BLT:SWISS 5->211 Y1846_MYCBO 4e-15 34.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57462.1 GT:GENE BAD57462.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2785609..2786304 GB:FROM 2785609 GB:TO 2786304 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57462.1 LENGTH 231 SQ:AASEQ MTTPRQRARARTMEDIKRIGREHLALHGAAALSLRAVARDLGVVSSAVYRYVASRDELLTLLVVDGYNALGDTVDAAIAAAPEDPAERLRAAARAVRAWALAEPAWYGLLFGTPVPGYDAPAEQTVDPGTRVIAALLRIAADAHERGLLAKPARPVRVSPDLARSFARVGAEFGVRLPDGLVPRLVSVWTALFGAVGFDVFDMYGRDTFADRDELFELLVENLVELLGLPA GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 5->211|Y1846_MYCBO|4e-15|34.0|203/234| SEG 24->36|lalhgaaalslra| SEG 43->55|vvssavyryvasr| SEG 75->105|daaiaaapedpaerlraaaravrawalaepa| SEG 214->229|elfellvenlvellgl| HM:PFM:NREP 1 HM:PFM:REP 22->59|PF00440|9.7e-10|42.1|38/47|TetR_N| HM:SCP:REP 6->82|2gfnA1|1.2e-09|33.8|77/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 83->228|1zk8A2|5.5e-06|27.5|102/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 20 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- ----1----------11----1---1------11111111---1-11------11------1---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-11| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccc //