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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57464.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  26/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:243 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->204 2qibA PDBj 4e-09 26.2 %
:RPS:PDB   14->218 3e7qA PDBj 8e-12 12.6 %
:RPS:SCOP  24->93 2hkuA1  a.4.1.9 * 1e-08 20.6 %
:RPS:SCOP  101->209 2genA2  a.121.1.1 * 4e-04 16.7 %
:HMM:SCOP  13->102 1t33A1 a.4.1.9 * 8.8e-10 22.7 %
:HMM:SCOP  97->215 2genA2 a.121.1.1 * 0.00019 18.8 %
:HMM:PFM   46->72 PF00440 * TetR_N 7.2e-07 33.3 27/47  
:BLT:SWISS 13->222 Y472_MYCTU 4e-10 27.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57464.1 GT:GENE BAD57464.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2787673..2788404) GB:FROM 2787673 GB:TO 2788404 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57464.1 LENGTH 243 SQ:AASEQ MSISASPDPPRGGRQARWQPHNDRRRERIVAALIELIEETPPGIEVPMQRITERAGLAKSVVYRQFSGRDELDRRARTAISDQFADTLATALDVSVGSINEILHRTIAAVVDWIDGHASLYEFLRRGPALGDPDDVDGVSSLKDRIAADTRGLVSGLAGVIGVVDEPVVDTMTFAIVSMTEATVTRWVRSPDRLMDRDRLVTELAGYAWSVLDGVCRAQGLLIDPDEPLLSVLTRLSDVQTPG GT:EXON 1|1-243:0| BL:SWS:NREP 1 BL:SWS:REP 13->222|Y472_MYCTU|4e-10|27.9|190/234| BL:PDB:NREP 1 BL:PDB:REP 23->204|2qibA|4e-09|26.2|168/217| RP:PDB:NREP 1 RP:PDB:REP 14->218|3e7qA|8e-12|12.6|198/208| HM:PFM:NREP 1 HM:PFM:REP 46->72|PF00440|7.2e-07|33.3|27/47|TetR_N| RP:SCP:NREP 2 RP:SCP:REP 24->93|2hkuA1|1e-08|20.6|68/70|a.4.1.9| RP:SCP:REP 101->209|2genA2|4e-04|16.7|102/118|a.121.1.1| HM:SCP:REP 13->102|1t33A1|8.8e-10|22.7|88/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 97->215|2genA2|0.00019|18.8|117/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 37 OP:NHOMOORG 26 OP:PATTERN -------------------------------------------------------------------- --------------31111-1222--111111-1113321----1-------------------112-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 91.8 SQ:SECSTR #############HHHHHTccHHHHHHHHHHHHHHHHHHHHHHcHccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHTcHHHHcGGGHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHHHHcTTccccHHHHHHHHHHHHHHHHTTGGGGHHHTHHHHHcHHHHHHHH####### DISOP:02AL 1-28, 240-243| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccc //