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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57470.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  173/915 : Eukaryota  41/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->281 1cqwA PDBj 1e-21 29.9 %
:RPS:PDB   9->283 1bn6A PDBj 1e-20 20.9 %
:RPS:SCOP  13->283 1a7uA  c.69.1.12 * 1e-22 21.7 %
:HMM:SCOP  9->286 1cv2A_ c.69.1.8 * 7.3e-51 28.9 %
:RPS:PFM   62->267 PF00561 * Abhydrolase_1 8e-07 31.2 %
:HMM:PFM   61->158 PF00561 * Abhydrolase_1 3.7e-17 34.4 90/231  
:HMM:PFM   226->282 PF00561 * Abhydrolase_1 1.6e-08 23.2 56/231  
:HMM:PFM   35->78 PF12146 * Hydrolase_4 1.6e-05 27.3 44/79  
:BLT:SWISS 1->285 DHMA2_MYCTU 7e-88 54.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57470.1 GT:GENE BAD57470.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2793222..2794082 GB:FROM 2793222 GB:TO 2794082 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD57470.1 LENGTH 286 SQ:AASEQ MQITFVPDATLYPFASRWFDSSVGRVHYIDEGAGPTILFCHGAPAWSFLYRRIVRALRDRFRCVAVDHLGFGLSERPTGFGYTVAEHTAVLGELIDHLRLEDFVVMGHDWGGPIGLGAAGARADRVRGVVLGNTALWPIDALANRVFSVVMSSRPLQRRILEHNFLIDRVLLAELRGVLTKAEADHYRGVQPTPAARRGLAVMPGQIRAARPLLEELARKVPERLGDKPTLAVWGMRDVVFRPSACLPRVRAMFGDLEVVELSGARHFVQEHEPDAIAVAITERFS GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 1->285|DHMA2_MYCTU|7e-88|54.4|285/286| SEG 115->132|glgaagaradrvrgvvlg| BL:PDB:NREP 1 BL:PDB:REP 10->281|1cqwA|1e-21|29.9|264/295| RP:PDB:NREP 1 RP:PDB:REP 9->283|1bn6A|1e-20|20.9|273/291| RP:PFM:NREP 1 RP:PFM:REP 62->267|PF00561|8e-07|31.2|189/211|Abhydrolase_1| HM:PFM:NREP 3 HM:PFM:REP 61->158|PF00561|3.7e-17|34.4|90/231|Abhydrolase_1| HM:PFM:REP 226->282|PF00561|1.6e-08|23.2|56/231|Abhydrolase_1| HM:PFM:REP 35->78|PF12146|1.6e-05|27.3|44/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 13->283|1a7uA|1e-22|21.7|263/277|c.69.1.12| HM:SCP:REP 9->286|1cv2A_|7.3e-51|28.9|270/0|c.69.1.8|1/1|alpha/beta-Hydrolases| OP:NHOMO 314 OP:NHOMOORG 214 OP:PATTERN -------------------------------------------------------------------- 1---2---------21232-32--5433333251111----1-1-1-1-11-1-------12---12523-------------------------------1-1-1--1---------------------------111-----1122-----11----------111-1-------------1-------------------------1-11-------------------2--------------------------------------------------------------------------------------------------------------------------------------------1-21111-----1-334----2311------------1-2--2-1-31--------21-1----1--2----------------------1-------------------------------21----111-122-211------12------122---1--11-------12----1---------------------2111----------1211--1-1--2--1---------------------------------1-1-1-11111114111111111121-----1------------1-------------------------------1-1-----------------------------------------------11111-----111------------------------1-1-------------------------------1----------11111111111111----11---------------------------------------------------1- --------------12-1----1-------------------------12--------------------------11-1---------------------------1--422-222---1------1-------------1-12-----1--1-----111133-------115--------11-231--11-3--2- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 99.3 SQ:SECSTR #cTTccccccccccccEEEEETTEEEEEEEEcccccEEEEccTTccGGGGTTTHHHHTTTccEEEEccTTcTTccccccTcccHHHHHHHHHHHHHHTTcccEEEEEEEHHHHHHHHHHHHcGGGEEEEEEEEEccccccGGGccHHHHHHHHHHTcTTHHHHHHTTccHHHHTHHHHTccccccHHHHHHHHGGGccGGGGHHHHHHHHHcHHHHHHHHHHHHHccccEEEEEEEEccccTcHHHHHHHHHHcTTEEEEEEEEEcccGGGTcHHHHHHHHHHHT# DISOP:02AL 286-287| PSIPRED ccccccccccccccccEEEEEccEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccEEEEEcccccccHHHcHHHHHHHHHHHHc //