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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57472.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  42/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:303 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->184 1z69A PDBj 1e-12 34.4 %
:RPS:PDB   1->298 1brlB PDBj 2e-25 13.2 %
:RPS:SCOP  1->301 1ezwA  c.1.16.3 * 2e-24 20.3 %
:HMM:SCOP  1->301 1f07A_ c.1.16.3 * 1.3e-56 34.6 %
:RPS:PFM   22->276 PF00296 * Bac_luciferase 2e-10 31.1 %
:HMM:PFM   1->279 PF00296 * Bac_luciferase 7.6e-63 35.4 277/307  
:BLT:SWISS 28->281 MER_ARCFU 3e-13 27.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57472.1 GT:GENE BAD57472.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2795494..2796405) GB:FROM 2795494 GB:TO 2796405 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57472.1 LENGTH 303 SQ:AASEQ MRIGIMLNEHAGPDSLRLLTDELRRNADEGFDSSWLTHVFGVDALTALAVAGSRVPDIAIGTAVVPTYPRHPGALAQQARTTALAVGPDRLTLGIGLSHQMVIENMYGYDFARPVRHLREYLEVLMPLVDGQPVSFSGETVSANLQLSVPNDDRVPVLVAALGEQMLRLAGKRTDGTVLWMTGPTTIRDHIAPTITAAATEAGRPAPRIVCALPVLVTDDPDGARERAAKVFKIYGSLPSYRAMMDREGAAGPADLAIVGTEDQVAERVRTVFAAGATEFVGIVFADGDDATRTRKLLTDLKS GT:EXON 1|1-303:0| BL:SWS:NREP 1 BL:SWS:REP 28->281|MER_ARCFU|3e-13|27.7|249/332| SEG 74->85|alaqqarttala| SEG 191->202|iaptitaaatea| BL:PDB:NREP 1 BL:PDB:REP 29->184|1z69A|1e-12|34.4|154/327| RP:PDB:NREP 1 RP:PDB:REP 1->298|1brlB|2e-25|13.2|296/319| RP:PFM:NREP 1 RP:PFM:REP 22->276|PF00296|2e-10|31.1|254/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 1->279|PF00296|7.6e-63|35.4|277/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 1->301|1ezwA|2e-24|20.3|295/347|c.1.16.3| HM:SCP:REP 1->301|1f07A_|1.3e-56|34.6|289/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 153 OP:NHOMOORG 56 OP:PATTERN -----------------------13-11--13---11-----------11111--------------1 ---12---------25711-17--4811111357772233-8-C-2--1-----------233-41422-2-----------2--------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 301 STR:RPRED 99.3 SQ:SECSTR cEEEEEEccccccccHHHHHHHHHHHHHTTccEEEEcccccccHHHHHHHHHHHccccEEEEEEEEcTTccHHHHHHHHHHHHHHHHTccEEEEEEccccHHHHHHTTcccTTHHHHHHHHHHHHHHHHHHcEEcccccccccccEEccccTTccEEEEEEccHHHHHHHHHTTccEEEcTTccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHcTTccHHHHHHHHHHHcEEEcHHHHHHHHHHHHHHHcccEEEEEcTTcccHHHHHHHHHHH## DISOP:02AL 302-304| PSIPRED cEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccEEEcccccccccccccEEEEEcccHHHHHHHHHHccEEEEccccHHHHHHHHHHHHHHHHHHccccHHHEEEEEEEEEEccHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHcc //