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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57481.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  139/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:251 amino acids
:PSIPRED
:RPS:PFM   104->232 PF01790 * LGT 4e-14 39.5 %
:HMM:PFM   10->228 PF01790 * LGT 2.4e-31 30.1 219/257  
:BLT:SWISS 104->239 LGT_RALME 5e-16 40.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57481.1 GT:GENE BAD57481.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2803046..2803801 GB:FROM 2803046 GB:TO 2803801 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57481.1 LENGTH 251 SQ:AASEQ MVPQLIGGIPTHGFFVALGVAVAAVVFVLECRRRAALREESLVAVTGALVGGAIGMRLSSLAETLDPYESWLFGARSVLGGLLGAYLGVLVAKRLIGYRERTGDLFAPAVALGMAVGRIGCHLTEAPGRITGLPWGVHAPGTVPQCPGCASGAAMHPSFLYEIAFHLAAFAALRWARTRITAPGELFTLYIGAYAIFRFLVEFTRANDTVWLDLTRPQWFLLPGLVLVAVRLTLGYRRGTYDAVLRRKVAA GT:EXON 1|1-251:0| BL:SWS:NREP 1 BL:SWS:REP 104->239|LGT_RALME|5e-16|40.3|129/270| TM:NTM 4 TM:REGION 7->29| TM:REGION 72->92| TM:REGION 156->177| TM:REGION 218->236| SEG 13->44|gffvalgvavaavvfvlecrrraalreeslva| SEG 78->92|vlggllgaylgvlva| RP:PFM:NREP 1 RP:PFM:REP 104->232|PF01790|4e-14|39.5|129/251|LGT| HM:PFM:NREP 1 HM:PFM:REP 10->228|PF01790|2.4e-31|30.1|219/257|LGT| GO:PFM:NREP 4 GO:PFM GO:0009249|"GO:protein lipoylation"|PF01790|IPR001640| GO:PFM GO:0016020|"GO:membrane"|PF01790|IPR001640| GO:PFM GO:0016757|"GO:transferase activity, transferring glycosyl groups"|PF01790|IPR001640| GO:PFM GO:0042158|"GO:lipoprotein biosynthetic process"|PF01790|IPR001640| OP:NHOMO 152 OP:NHOMOORG 139 OP:PATTERN -------------------------------------------------------------------- -21--111111---111----11112------123211----------------1-------21----2---111-------1--------------------------------------------------1-------111---------------------1111---------------------1-----------------------------------------1-------------------------------------------------------------------------------------------22------------1---------1-1--------11--11--------------------------------------------------------------------------2--111111------------------------------------------1-1--------1111--------------1----------1-1-----1--------------1-------111-111----1-1------1-----1---1-1-------1-----111111-----------1-1---11-12---11--1111---1111-1--1-----1--1---------------------------------------------------------------------------------------------11111----1--1-111-1------1111----------1-1111----1----1-------------1---1111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcc //