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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57483.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  54/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:526 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   123->245 2bw2A PDBj 7e-07 5.0 %
:RPS:SCOP  129->292 1tv7A  c.1.28.3 * 4e-12 22.5 %
:HMM:SCOP  109->313 1tv8A_ c.1.28.3 * 2e-26 25.8 %
:RPS:PFM   128->242 PF04055 * Radical_SAM 3e-06 36.9 %
:HMM:PFM   126->284 PF04055 * Radical_SAM 1.4e-20 29.9 154/166  
:BLT:SWISS 24->369 Y619_METJA 9e-22 26.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57483.1 GT:GENE BAD57483.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2804184..2805764 GB:FROM 2804184 GB:TO 2805764 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57483.1 LENGTH 526 SQ:AASEQ MMSRRPTGTGMPLRGDRILRYVNAFCPHCHRADPDRPLAEVARRSGWLAERDGRVYLERGCPEHGMVRTLYDEHPEILAYLEEWTAPTKAHLPDTPGNFDPVPAAYLRGLPEMQTQHTCILLADILAGCNLRCPTCFADSTPELAGVVAVADVLANVDQRLAREHGRLDVLMLSGGEPTLHPDLPTLLAELTARPITRILINTNGVRLARDESLVALLAEHRERVEVYLQYDGVSAAASRHHRGGDLRALKAEALRRLSGHGIFTTLVMTVALGVNDDEIGAVVRTALDTPFVGGVSLQPQFGSGRGGAIDPMHRLTHTGVLARLGPQTDGLVTWRDLTALPCSHPHCCSVGYLLRDDAGDWRSLTALLGHDTLKQRLGLVANRIADSDIPAELRLAVRESLLGLLSEQSSLSHPDIGRVWQTICQHCDLGMSTLLTLASSALPGRKARLRTLLGERVVRLTVKPFMDIDTMLEERLTQCCVHVGTRAEQDQCAPFCAVQAWPALSRQRLSAAAPAGAALLPVTTP GT:EXON 1|1-526:0| BL:SWS:NREP 1 BL:SWS:REP 24->369|Y619_METJA|9e-22|26.1|330/506| SEG 144->158|lagvvavadvlanvd| SEG 247->258|lralkaealrrl| SEG 401->413|sllgllseqssls| SEG 433->443|stlltlassal| SEG 512->522|aaapagaallp| RP:PDB:NREP 1 RP:PDB:REP 123->245|2bw2A|7e-07|5.0|119/140| RP:PFM:NREP 1 RP:PFM:REP 128->242|PF04055|3e-06|36.9|111/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 126->284|PF04055|1.4e-20|29.9|154/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 129->292|1tv7A|4e-12|22.5|160/327|c.1.28.3| HM:SCP:REP 109->313|1tv8A_|2e-26|25.8|198/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 114 OP:NHOMOORG 105 OP:PATTERN 11111111111111111111111-----1---111111-----111111-22-111111111-11-21 132--------------11-1----111111--1111-----------------1-----11----------------------------------------1------1--------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------1321-1---------------1----------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-111111111--1-111-111--1--1-1-------------------------------------------------------1--------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 261 STR:RPRED 49.6 SQ:SECSTR #############################################ccEETTEEccccEEEcccTTcccccccEEEEEEEEEEEHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccEEEEEEEcccEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEHHHHHHHcTTcEEEEEETTEEEEEEEcccccTGGGTcccEEEETTTEEccEEccccccTTcccccccccccTccTTccHHHHHHHHHcccHHHHHHHHHHHHTTcEEEEccEEccTTccHHHHHHHHHHHHHcccccEEEEEEcccccc############################################################################################################################################################################################################################ DISOP:02AL 1-9| PSIPRED cccccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHccccEEEEEEccEEEEEEEcccccEEEEEEEccHHHHHHHHHHccccccccccccEEEccccccccccccccccccEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHcccEEEEEEEccccHHHHHHHccccHHHHHHHHHHHHHHccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEEEccccccccHHHcccHHHHHHHHHHHHccccccccEEEccccccccccEEEEEEEccccEEEEcccccHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHccccccEEEEcccHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHcEEEEEEEEccccHHHHHHHHHHccEEEEEccccccEEEEHHHHHHHHHHHHHHHHccccccEEEEEccc //