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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57490.1
DDBJ      :             putative amino acid oxidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  81/915 : Eukaryota  71/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:512 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   51->502 1reoA PDBj 1e-23 27.7 %
:RPS:PDB   51->505 3bi2A PDBj 4e-21 12.7 %
:RPS:SCOP  51->355 1f8rA1  c.3.1.2 * 1e-30 25.9 %
:RPS:SCOP  473->502 1f8rA1  c.3.1.2 * 6e-07 46.7 %
:HMM:SCOP  1->505 1f8rA1 c.3.1.2 * 8.4e-40 29.2 %
:RPS:PFM   51->498 PF01593 * Amino_oxidase 7e-15 32.9 %
:HMM:PFM   45->503 PF01593 * Amino_oxidase 3.9e-53 25.8 427/449  
:BLT:SWISS 53->502 YOBN_BACSU 9e-35 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57490.1 GT:GENE BAD57490.1 GT:PRODUCT putative amino acid oxidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2809745..2811283 GB:FROM 2809745 GB:TO 2811283 GB:DIRECTION + GB:PRODUCT putative amino acid oxidase GB:PROTEIN_ID BAD57490.1 LENGTH 512 SQ:AASEQ MSATAQHRPIRGESLFDESFAFPAPLRTPAPAAPARVAVVGAGVGGLAAAYELQRRGLAVTVFERTARPGGRIRTWRFWDGTHGELGAMRIPGNHHCTLHYIREFALPTRPFVNANPDALYLLRDTRVRRADVARVVNGYRLAAGEQGDPLTLLDTLLRSAWEGLGEHRRKALLAGDVADPELERLAGTSLWQFARERLSAEAWDLVGHASGLLHYEHASLLEVLVDYFGLFNVDQVELVDGTDALVRAFVAALRPGTLRLATRVTAVRVDGDGVRVHGEQLGAPVEEDFDYLVCAVPAPGLDQIEISPGLPARQRQAIRGMNYASSTKTLLHLRDRPWEYRDGIYGGGSFTDLPIQQVWYPADNAVRVPGTDRLTARDRDRSHRPAVLTAAYLWENNARRFAALPEADRTRVVLSALDKLHPGIVASVDDVVHWTWDEQVGLGGGAFAYLAPGEHARYLAGIGAAHPAPAPRIFFAGEHLSVAHAWIQGALQSALDAVAQVLDRVSLARAA GT:EXON 1|1-512:0| BL:SWS:NREP 1 BL:SWS:REP 53->502|YOBN_BACSU|9e-35|31.6|418/474| SEG 20->50|fafpaplrtpapaaparvavvgagvgglaaa| SEG 124->137|rdtrvrradvarvv| SEG 268->277|vrvdgdgvrv| SEG 465->472|aahpapap| BL:PDB:NREP 1 BL:PDB:REP 51->502|1reoA|1e-23|27.7|412/484| RP:PDB:NREP 1 RP:PDB:REP 51->505|3bi2A|4e-21|12.7|432/494| RP:PFM:NREP 1 RP:PFM:REP 51->498|PF01593|7e-15|32.9|392/426|Amino_oxidase| HM:PFM:NREP 1 HM:PFM:REP 45->503|PF01593|3.9e-53|25.8|427/449|Amino_oxidase| RP:SCP:NREP 2 RP:SCP:REP 51->355|1f8rA1|1e-30|25.9|286/370|c.3.1.2| RP:SCP:REP 473->502|1f8rA1|6e-07|46.7|30/370|c.3.1.2| HM:SCP:REP 1->505|1f8rA1|8.4e-40|29.2|342/371|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 224 OP:NHOMOORG 152 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------1-----------------------1----------------------------------------1---1---------------------------------11---------11---------1------111-------------11--------22222222-222222--1--1222--1-1--------11-------------------------------------------------------------------------------------------1--2111111111-1-------1-----------------------------222------------------------------------------------------------1-----------------111---1----------------------------------------------------------------1-------------------1--------------------------------------------------11-------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------121--1111-1-------11-1--------------------------11111-1---------------------------------------------------------------- ----22----------1111-122111----------------------123222122-111----------------------------241211-------1------233121-11--12154-31372-21---1-21112-111121-311122---------------1--------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 462 STR:RPRED 90.2 SQ:SECSTR ##################################################HHHHTTcccEEEEcccccccTTccEEEcGGGcEEEccccEEccTTTHHHHHHHHHHHHHccccEEccccccEEEEEEEccccccEEcccccEEEETTTEEcccTTTcHHHHHHHHHHHHHHHHTTcTTcccccHHHHHHHHHHHHGGGccHHHHHHHHHHGGGGHHHHTccTTTcHHHHccccccccEEEcccHHHHHHHHTcccGGGEETTccEEEEEEETTTEEEEEETTccEEEEEEHGGGGccccccTTccEEEccccHHHHHHTTccEEEccEEEEEEEcccccccccccEEEEcccccHHHHHHHHHcccHHHHHHHHcccccccTTcccEEEEEEEEccTHHHHHHTTTTcHHHHHHHHHHHHHHHHccccEEEEEEEccTTTcTTTcccEEEccTTcccHHHHHHHHHHTcccccEEEccTTcccTTTcHHHHHHHHHHHHHHHHHHHHHTGGG DISOP:02AL 25-32, 510-512| PSIPRED ccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccEEEEEccccEEEEEEEEEEcccHHHHHHHHHHcccccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHccccEEEEccEEEEEEEccccEEEEEEEcccEEEEEccEEEEEccHHHHHHHHccccccHHHHHHHHHccccEEEEEEEEEccccccccccEEEEEEEEcccccEEEEEccccccccccEEEEEccccccccccEEEEEEEccccHHHHHcccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccEEEEEccccccHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccc //