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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57493.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  219/915 : Eukaryota  36/199 : Viruses  0/175   --->[See Alignment]
b.92.1c.1.9
:539 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   11->513 3etkA PDBj 5e-15 24.7 %
:RPS:PDB   1->77,273->533 1ejxC PDBj 6e-17 15.6 %
:RPS:SCOP  4->89 2gokA1  b.92.1.10 * 5e-11 18.6 %
:RPS:SCOP  327->534 2a3lA1  c.1.9.1 * 2e-17 9.6 %
:HMM:SCOP  1->538 1ejrC1 b.92.1.1 * 3.8e-25 35.0 %
:RPS:PFM   326->508 PF07969 * Amidohydro_3 7e-21 38.3 %
:HMM:PFM   59->508 PF07969 * Amidohydro_3 1.3e-52 33.5 385/404  
:BLT:SWISS 4->191 AEPA_PECCC 1e-15 28.3 %
:BLT:SWISS 375->533 HUTI_STRSV 2e-04 29.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57493.1 GT:GENE BAD57493.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2812790..2814409 GB:FROM 2812790 GB:TO 2814409 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57493.1 LENGTH 539 SQ:AASEQ MSTADLIVTGGPVHTMDPDRPRASAVAVTGGRITAVGAEEVLELRGASTEMIDLGGRCLLPGFVEAHTHPTQDQMMYSDAVVDIRPVTTCPSAEDVHRTIERALAAAPADAPLIFYGLDILLQKGFPEPTRGWLDDLGPARPIVIWQNSGHLAYANSAALAQAGVHAATPDPVGGSFERGATGEPTGRVYEAPAVLAVVAPILAGELTGPGLLARQHAELARRGVTLCSDMAFSDRLRPLTDELYRRDLAKVRMRVYEMSTADGRASCPLDNGDDMFRQIGIKLWLDGSPWIGNIDISFPYLNTAATAALGLAHDHRGHANYTAAQLDSIMAAYHPHGWQMACHIHGDHGVDTILDVYERALATHPRPDHRLRLEHCGAMTAEQFRRAARLGVTCSLFIDHIYHWGDVLVDDLFGPDHGAHWTRARSALDAGVRISFHNDSPVTEEEPLRNIAAAVTRTTRTGRVLAPQERITLDQALRAQTLDAAYQLFADDITGSITPGKYADLVVLDRDPYDVDPAELPAIEVHATYLAGTPTFSG GT:EXON 1|1-539:0| BL:SWS:NREP 2 BL:SWS:REP 4->191|AEPA_PECCC|1e-15|28.3|184/465| BL:SWS:REP 375->533|HUTI_STRSV|2e-04|29.5|139/421| TM:NTM 1 TM:REGION 187->209| SEG 103->113|alaaapadapl| SEG 153->163|ayansaalaqa| SEG 192->204|apavlavvapila| SEG 304->313|taataalgla| SEG 450->467|rniaaavtrttrtgrvla| BL:PDB:NREP 1 BL:PDB:REP 11->513|3etkA|5e-15|24.7|453/467| RP:PDB:NREP 1 RP:PDB:REP 1->77,273->533|1ejxC|6e-17|15.6|331/555| RP:PFM:NREP 1 RP:PFM:REP 326->508|PF07969|7e-21|38.3|175/378|Amidohydro_3| HM:PFM:NREP 1 HM:PFM:REP 59->508|PF07969|1.3e-52|33.5|385/404|Amidohydro_3| RP:SCP:NREP 2 RP:SCP:REP 4->89|2gokA1|5e-11|18.6|86/103|b.92.1.10| RP:SCP:REP 327->534|2a3lA1|2e-17|9.6|177/616|c.1.9.1| HM:SCP:REP 1->538|1ejrC1|3.8e-25|35.0|103/182|b.92.1.1|1/1|Composite domain of metallo-dependent hydrolases| OP:NHOMO 444 OP:NHOMOORG 265 OP:PATTERN --1--1------------------111---1--------------1----1----1----1------- 132--1--------21111-12--3311111223331587------------5-2311----1-117--11--------131-----------------1---112--11--------------------------32233---13---1----------------1---------------------11------1---111--211------11-2----2--------31---------------------------1-----11--------------------------------------------------------11-----------1-1-----------11----------5----1--2-2--1112-------211---3--2-222122232-2--------2-12------11--133-1212111-311126--------------1-------------------------------1281--321-311523-----111-1111--41-4233-1--2--1--2-1--11------2---------------12------1---1--------------21--------------------------2--1--1--3111-11---21-1---22-2-12---1---------1------------------------------------11111--1--------------------------1--------------1----------11--------------------------11-2222261111122---------------122------111211---------------2------------------------------------------------------- --------------1--1-----1-11---------------------113111-1-1-111---------------------------132-1321-11--------------------------------------------------------------11---------62----------1113121------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 528 STR:RPRED 98.0 SQ:SECSTR GGcccEEEEEEEEEETTTTEEEEEEEEEETTEEEEEEcEEccEEccTTcEEEEcTTcEEEEcEEEEEEEcccTTHHHHHHHHHHHTTEEEHHHTHHHHHEEHHHHHHHTcccccEEEEEEcHHHHTccccHHHHTTcc##ccEEEEETTccEEEEcHHHHHHHcccccT######TEET#TTTEEEHHHHHHHHHHHHHTTccHHHccccccHHHHHHHHHHHTTTcccEEEEEEEcccccHHHHHHHHHHHHHccccEEEEcccTTTTcccHHHHHHHHHTTcccEEEEEEEcccccHHHHHHHHHHTccEEEEGGGcccccHHHHHHHHHHHHHHTcEEEEEccTTcccccHHHHHHHHTTccEccEEEccTTcTTcccTTTGGGGGGcTTEEEEEEcTTccccTTHHHHHHHHHHHccHHHHHHHHHTTcccEEEccTTccccTTcHHHHHHHHHHHHHHHHcccTTcHHHHHHHHHHTHHHHHHTTcTTTcccccTTccccEEEEcGGGTTTcccEEEETTEEEEEEEccccc## PSIPRED cccccEEEEccEEEEccccccEEEEEEEEccEEEEEccHHHHHccccccEEEEccccEEEccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHccccccEEEEEcccHHHHHHHHHHHHcccccccccccccEEEEcccccccEEEEccccEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHcccccccEEEEEccccccccccccccccccccccccEEEEccccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccHHHHHHHHHcccEEEEccccccccHHHHHHHHccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHHHHHHcccccEEEEcccccccEEEEccccccccHHHHcccEEEEEEEccEEEEcc //