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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57524.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  55/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:284 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->180 2b81C PDBj 8e-07 28.0 %
:RPS:PDB   13->180 2b81A PDBj 2e-22 24.8 %
:RPS:SCOP  1->230 1rhcA  c.1.16.3 * 6e-22 21.5 %
:HMM:SCOP  1->280 1rhcA_ c.1.16.3 * 3.9e-62 39.0 %
:RPS:PFM   19->228 PF00296 * Bac_luciferase 8e-15 37.6 %
:HMM:PFM   14->233 PF00296 * Bac_luciferase 1.7e-59 45.1 204/307  
:BLT:SWISS 7->178 Y965_MYCBO 8e-15 30.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57524.1 GT:GENE BAD57524.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2843900..2844754 GB:FROM 2843900 GB:TO 2844754 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57524.1 LENGTH 284 SQ:AASEQ MHFAVSYSSAHFGTDPDRLVAYARHAESCGFDGLYLPEHLVLGPGIELHGAEVAPTLPFLDPLDTLAYVAAATERLLLGTGVLLLPYRHPVVLAKQLATIDVLSKGRMRLLTVGLGTVPREAAATGVDFRARGRRADEAIDVLRLLWSGDQDGVSFHGEFFDLDRVVQYPTPVRPLPIHIGGSSEAAARRAGLRGDGYFAGGALMPWDRAAQWELARATAAAAGRDPDALEYTRWSGIDMTAERLDAFVAQGVTRVVVSATAADPAEQLDQLSAFAERFGLGPR GT:EXON 1|1-284:0| BL:SWS:NREP 1 BL:SWS:REP 7->178|Y965_MYCBO|8e-15|30.2|169/288| SEG 55->66|ptlpfldpldtl| SEG 76->85|lllgtgvlll| SEG 181->195|ggsseaaarraglrg| SEG 210->223|aaqwelarataaaa| BL:PDB:NREP 1 BL:PDB:REP 12->180|2b81C|8e-07|28.0|157/310| RP:PDB:NREP 1 RP:PDB:REP 13->180|2b81A|2e-22|24.8|157/308| RP:PFM:NREP 1 RP:PFM:REP 19->228|PF00296|8e-15|37.6|194/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 14->233|PF00296|1.7e-59|45.1|204/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 1->230|1rhcA|6e-22|21.5|219/330|c.1.16.3| HM:SCP:REP 1->280|1rhcA_|3.9e-62|39.0|267/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 199 OP:NHOMOORG 57 OP:PATTERN ------------------------1--------------------------1---------------- ----7--1------2AA44-47--9744444835654468192E11-------1------224-112212------------2---------------------------------------------------------1----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-----------------------------1-----------------------------------------------------------------------------12----------------------1111-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 281 STR:RPRED 98.9 SQ:SECSTR cEEEEEEcccccccccTTHHHHHHHHHHHTccEEEEcccccccGGGccTTTTTcccHHHcccGGGHHHHHTTccccEEEEEEEETTTccHHHHHHHHHHHHHHcTTcEcEEEEEccccHHHHHHHTcccTTHHHHHHHHHHHHHHHHHcHccccEEEETTEEEEcccccccccccccEEEEEccHHHHHHHHHTTccEEEcTTccHHHHHHHHHHHHHHHHHHcccTTccccEEEEEEcccHHHHHHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHcc### DISOP:02AL 283-284| PSIPRED cEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEHHccccccccccccccccccccccHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccEEEccccEEEcccccccEEEEEcccHHHHHHHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHcccHHHEEEEEEEEccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccc //