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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57533.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  148/915 : Eukaryota  115/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:358 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->274 2iodC PDBj 3e-20 29.8 %
:RPS:PDB   4->335 1e7rA PDBj 5e-17 13.5 %
:RPS:SCOP  4->335 2b69A1  c.2.1.2 * 2e-23 14.2 %
:HMM:SCOP  1->334 1y1pA1 c.2.1.2 * 3.7e-60 33.4 %
:RPS:PFM   6->245 PF01073 * 3Beta_HSD 2e-07 28.8 %
:HMM:PFM   5->245 PF01370 * Epimerase 6.1e-23 30.2 225/238  
:BLT:SWISS 5->275 DFRA_DIACA 1e-21 31.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57533.1 GT:GENE BAD57533.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2852576..2853652 GB:FROM 2852576 GB:TO 2853652 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57533.1 LENGTH 358 SQ:AASEQ MNTRVLVTGATGFVAGHVIAELLAHGHPVRATVRDLADTGKRAHLVELARRLDGDLEFAAADLGADTGWAAAVAGCAAVLHVASPFPATPPKDERELIEPAVQGTLRVLRAAADADVRRVVLTSSVAAVAYGHGDDAVRTEADWSVVDRVPAYQKSKTLAERAAWDFVAALPDERGLELVALNPGMILGPLLTAATSTSHEPVRKLLAREVPGSVRTGWTPVDVRDLAVAHRLALETPAAAGNRYICAAPPLWMGELARMLADEYNPRGYRVPTRVLPNWLIRALALVDGTVRLTVPVLGRTENVSAAKAEAELGWRMRPVRDTVLDTAESLIAHGLVPTPAAAPASPRRTRPAPASA GT:EXON 1|1-358:0| BL:SWS:NREP 1 BL:SWS:REP 5->275|DFRA_DIACA|1e-21|31.2|263/360| SEG 64->83|gadtgwaaavagcaavlhva| SEG 106->122|lrvlraaadadvrrvvl| SEG 339->357|ptpaaapasprrtrpapas| BL:PDB:NREP 1 BL:PDB:REP 5->274|2iodC|3e-20|29.8|262/325| RP:PDB:NREP 1 RP:PDB:REP 4->335|1e7rA|5e-17|13.5|297/314| RP:PFM:NREP 1 RP:PFM:REP 6->245|PF01073|2e-07|28.8|229/261|3Beta_HSD| HM:PFM:NREP 1 HM:PFM:REP 5->245|PF01370|6.1e-23|30.2|225/238|Epimerase| GO:PFM:NREP 2 GO:PFM GO:0003854|"GO:3-beta-hydroxy-delta5-steroid dehydrogenase activity"|PF01073|IPR002225| GO:PFM GO:0006694|"GO:steroid biosynthetic process"|PF01073|IPR002225| RP:SCP:NREP 1 RP:SCP:REP 4->335|2b69A1|2e-23|14.2|296/312|c.2.1.2| HM:SCP:REP 1->334|1y1pA1|3.7e-60|33.4|308/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 564 OP:NHOMOORG 263 OP:PATTERN -------------------------------------------------------------------- -1--1-------1-1-1----------------1112--------------------1---------1---------------------------------1---211--------------------111111-1--------1-211211------------1-1221-1-------1-----------1----------------------------------1111--1-111111-1111111---1---1--------22----1-----1-1--------11-------------------------------------11---------------------------------------------------------11111--------------------11111-1--2-----1---11------11-1--------11111111211111-------------------------------11---1-----2332321111111111111-11111111--------------1-------------------1-------------1-----11-111-1-----1-1--------------------------1---------------------------------1-----------------------------------------------------------------------------------------------------------1-----------------------1---1----------------1-----------------------------1-------------11----------------------------------------------------- --11364---1---1322122325854111111111-111111-1-4138248542221111433--121-471824443344422-4-573232342212-2----3892---------------------------------------------------122------1116171-----156KJP1JE2-11112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 94.4 SQ:SECSTR HccEEEEETTTcHHHHHHHHHHTTcTTEEEEcTTTccTTcHHHHHHHHHHHcccEEEEcccccTcTTTTHHHHTTccEEEEcccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHTTccEEEEEccHGGGccTTccccccGGGTTcccccGGGHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcEEEcTTccccTTcccHHHHHHHHHEEEcccccEEcEEEHHHHHHHHHHHHHccHHHHHHTccTTcccEEEcccccEEHHHTcEHHHHHHHHHTcccEEcEEEEccEEETTccccccccccccHHHHHHTTcccccHHHHHHHHHHHHHHTTcc#################### DISOP:02AL 342-358| PSIPRED cccEEEEEcccHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHcccEEEEccEEccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEccccccccHHHHHHHHHHHccccccccccccccEEHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHcccccccccHHHccHHHHHHHHHcccccHHHHccccccEEEcHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccHHcccccccc //