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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57535.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  52/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:295 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->112 1f07A PDBj 1e-09 30.8 %
:RPS:PDB   7->204 3c8nD PDBj 1e-19 18.7 %
:RPS:SCOP  6->181 1ezwA  c.1.16.3 * 8e-21 16.5 %
:HMM:SCOP  5->292 1ezwA_ c.1.16.3 * 5.4e-48 31.8 %
:RPS:PFM   27->169 PF00296 * Bac_luciferase 2e-08 38.8 %
:HMM:PFM   8->271 PF00296 * Bac_luciferase 7.8e-44 34.0 259/307  
:BLT:SWISS 8->112 MER_METTM 4e-09 30.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57535.1 GT:GENE BAD57535.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2853933..2854820 GB:FROM 2853933 GB:TO 2854820 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57535.1 LENGTH 295 SQ:AASEQ MNTQRPFRFGVNMVLAESRRDWVRKCRRVEELGFDVLGVADHLGMPAPFPAMAVAAEATERVRLTTFVLNTPFYNPVLLAREVAGLDQLTDGRVELGLGAGYVKAEFEQAGIPFESGGRRVAHLERTATTLRRLFADPDHRPRPAQPAGPPLLIAGWGDRLLRVAAAHARIIGFTGAAAARDGGPLLLAGERQLGERVDFVRAALGERASEVELNLLIQRVAGDGAAATELFETYRPAMVPEAAVDPRSVPTLLAGSPEAAAERLHELRERFGISYFTVLEDSMEAFAPILARAR GT:EXON 1|1-295:0| BL:SWS:NREP 1 BL:SWS:REP 8->112|MER_METTM|4e-09|30.8|104/321| SEG 46->58|papfpamavaaea| SEG 259->271|eaaaerlhelrer| BL:PDB:NREP 1 BL:PDB:REP 8->112|1f07A|1e-09|30.8|104/321| RP:PDB:NREP 1 RP:PDB:REP 7->204|3c8nD|1e-19|18.7|198/322| RP:PFM:NREP 1 RP:PFM:REP 27->169|PF00296|2e-08|38.8|139/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 8->271|PF00296|7.8e-44|34.0|259/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 6->181|1ezwA|8e-21|16.5|176/347|c.1.16.3| HM:SCP:REP 5->292|1ezwA_|5.4e-48|31.8|274/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 181 OP:NHOMOORG 52 OP:PATTERN -------------------------------------------------------------------- ----9---------3A722-27--5B22222654546378-82B15--2------------11-2252221--------------------------------------------------------------------------3--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-------11---1--------1--------------------------------------------------------3------------1------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 99.0 SQ:SECSTR HccTTccEEEEEEcTTTccHHHHHHHHHHHHHTTcEEEEcccccccccHHHHHHHHHHccccEEEEccccTTccccHHHHHHHHHHHHHcTTcEEEEEccccHHHHHHTTccccccHHHHHHHHHHHHHHHHHTcccEEEccccccTTcccEEEEcccHHHHHHHHHHcEEEccccHHHHHHTHHHHHHHHHHHTccGGGcEEHTTccGGGcccEEEEEEEEcccHHHHHHHHHHTHHHHHHHHHHHHHHHHcEEEcHHHHHHHHHHHHHHHcccEEEEEcTTcccHHHHHH### DISOP:02AL 1-2| PSIPRED cccccccEEccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccEEEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEEccccccccEEEEEcccHHHHHHHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHccccEEEccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcc //