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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57539.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:338 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->328 1ezwA PDBj 1e-10 25.8 %
:RPS:PDB   43->332 3c8nB PDBj 5e-20 19.8 %
:RPS:SCOP  35->332 1ezwA  c.1.16.3 * 3e-24 19.5 %
:HMM:SCOP  1->332 1f07A_ c.1.16.3 * 2.5e-53 34.5 %
:RPS:PFM   43->213 PF00296 * Bac_luciferase 3e-09 37.3 %
:HMM:PFM   10->306 PF00296 * Bac_luciferase 9.6e-58 34.4 273/307  
:BLT:SWISS 29->311 Y1395_MYCBO 4e-63 49.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57539.1 GT:GENE BAD57539.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2856597..2857613) GB:FROM 2856597 GB:TO 2857613 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57539.1 LENGTH 338 SQ:AASEQ MRVYTAIYGLTDSAERARALRAAGVAGVFTFEGPHDVFAPLTLAATVGGLDLLTNVAIAFPRNPIHLAHQANDLQLLSGGRFALGLGTQIRTQIERRFGATFDDPVERMAELVAALRAIFDCWQTGERLDFRGRYYRHTLMTPTFSPGPNPFGPPPIHLGALGPRMTAMAARVADGLLVMPFTSRRYLRERTMPAVDEGLAAAGRERADFTVVPEVIVAVGRSAAEQAAADAATRRLLAFYGSTPAYRPVLDLHGWGELQPELNALSKQGRWQEMAHLVDDDMLATIAARGTPAEVAADIRARVSGLSDRVCFYQPYAPDDATLVELVDHLVGADQAV GT:EXON 1|1-338:0| BL:SWS:NREP 1 BL:SWS:REP 29->311|Y1395_MYCBO|4e-63|49.1|283/340| SEG 14->28|aeraralraagvagv| SEG 142->156|tptfspgpnpfgppp| SEG 224->233|aaeqaaadaa| BL:PDB:NREP 1 BL:PDB:REP 41->328|1ezwA|1e-10|25.8|275/347| RP:PDB:NREP 1 RP:PDB:REP 43->332|3c8nB|5e-20|19.8|263/323| RP:PFM:NREP 1 RP:PFM:REP 43->213|PF00296|3e-09|37.3|161/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 10->306|PF00296|9.6e-58|34.4|273/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 35->332|1ezwA|3e-24|19.5|287/347|c.1.16.3| HM:SCP:REP 1->332|1f07A_|2.5e-53|34.5|310/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 145 OP:NHOMOORG 52 OP:PATTERN -----------------------12------21--1111111-----------1-------------- ----1---------36533-38--6533333476863344-5-41-----------------2-2-211-------------2-----------------------------------------------------11121-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 306 STR:RPRED 90.5 SQ:SECSTR ############################cccccTTcccccHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHcTTcEEEEEccccHHHHHHTTcccccccHHHHHHHHHHHHHHHHHTHTcccEEEEccccEcccEEEEEccccccTTcccEEEEcccHHHHHHHHHHccEEEEEccccHHHHHHTHHHHHHHHHHHTTccGGGcEEEEEEEEEcccHHHHHTTTGGGGTGGGGGGGccHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHTccHHHHHTTcEEEccHHHHHHHHHHHHHTTccEEEEEcccccHHHHHHHHHHHTHHT#### DISOP:02AL 337-338| PSIPRED cEEEcHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccEEccccEEEccccccccccccccccccEEEEEcccHHHHHHHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHccc //