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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57544.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  107/915 : Eukaryota  25/199 : Viruses  0/175   --->[See Alignment]
b.33.1c.3.1
:525 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   176->261 1ryiA PDBj 8e-05 30.1 %
:BLT:PDB   463->507 2zt9D PDBj 2e-09 48.9 %
:RPS:PDB   60->391 1b3mA PDBj 1e-16 12.8 %
:RPS:PDB   416->509 3cwbE PDBj 2e-12 19.6 %
:RPS:SCOP  60->307 1ng3A1  c.3.1.2 * 5e-14 15.6 %
:RPS:SCOP  441->509 1q90C  b.33.1.1 * 2e-10 29.0 %
:HMM:SCOP  39->400 1pj5A2 c.3.1.2 * 4e-36 31.9 %
:HMM:SCOP  417->509 1g8kB_ b.33.1.1 * 3.2e-16 35.2 %
:RPS:PFM   62->371 PF01266 * DAO 2e-05 30.0 %
:HMM:PFM   41->381 PF01266 * DAO 1.5e-47 27.9 326/358  
:HMM:PFM   437->510 PF00355 * Rieske 1.3e-13 27.0 74/97  
:BLT:SWISS 62->507 YHFW_BACSU 2e-57 29.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57544.1 GT:GENE BAD57544.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2864779..2866356) GB:FROM 2864779 GB:TO 2866356 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57544.1 LENGTH 525 SQ:AASEQ MIAPAAFRGPRNGYAPCMTSLWLNDAEVPARLRLTAGARYDTLVVGAGLVGLATALLLAESGREVAVLEARRVGAGTTGASTAKVSLLQGTRGSTIAQRHGTAALSRYVAANRDGLDWLLHFCADHDLDVQRVPAYTYAQDESELSSVRAEFEATRAVGLPTELVDQLDVPFPAHGAVRLAEQAQLDPMAVLAALAAEVEAHGAPIYESTRAQALRHDGGQIVVRTEHGDVSATNVVVATGTPIFDRGGFFARLTAQRSYLAAFRVPGPVPHEMYISAGQPSRSLRYHPTADGDLLLVGGSGHEVGRTRSEAAHVEQVLDWTRRWFPGAEPLYRWSAQDYHPVGELPYVGPLLPGQDGVLVASGFAKWGMTNGAAAALALAGRLTGKTPAWAGTLATWQPGELKSLGSGVQVNAAVAQHMSTGWLRLLGNSGTTVPPEGCGRVERHGLHPTAVSTVDGVTHEVSAVCSHLYGIVHWNDAERSWDCPLHGSRFAPDGSVLEGPATKPLPTRRSPLPASPATENLGS GT:EXON 1|1-525:0| BL:SWS:NREP 1 BL:SWS:REP 62->507|YHFW_BACSU|2e-57|29.7|445/509| SEG 42->59|tlvvgaglvglatallla| SEG 190->201|avlaalaaevea| SEG 374->381|aaaalala| BL:PDB:NREP 2 BL:PDB:REP 176->261|1ryiA|8e-05|30.1|83/364| BL:PDB:REP 463->507|2zt9D|2e-09|48.9|45/166| RP:PDB:NREP 2 RP:PDB:REP 60->391|1b3mA|1e-16|12.8|320/385| RP:PDB:REP 416->509|3cwbE|2e-12|19.6|92/196| RP:PFM:NREP 1 RP:PFM:REP 62->371|PF01266|2e-05|30.0|293/354|DAO| HM:PFM:NREP 2 HM:PFM:REP 41->381|PF01266|1.5e-47|27.9|326/358|DAO| HM:PFM:REP 437->510|PF00355|1.3e-13|27.0|74/97|Rieske| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01266|IPR006076| RP:SCP:NREP 2 RP:SCP:REP 60->307|1ng3A1|5e-14|15.6|243/276|c.3.1.2| RP:SCP:REP 441->509|1q90C|2e-10|29.0|69/126|b.33.1.1| HM:SCP:REP 39->400|1pj5A2|4e-36|31.9|257/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 417->509|1g8kB_|3.2e-16|35.2|91/133|b.33.1.1|1/1|ISP domain| OP:NHOMO 151 OP:NHOMOORG 136 OP:PATTERN ----------------------------------------------1---111--------------- ----1--1------111----1---1------11111-1-------------1-2-1-----1---111-----------1------------------1-1---111---------------------------------------1-----------------------------------1--------111111111211211121111111111111112-------2-------------------------------------------------------------------------------------------1111111111111-11----1-111-------11---1-1-----------------------2--1---------------------------1-------1-2---13-----------------------------------------------------------------------------------------------1------1---------------1--------------1---1-----1-------------1-----1-11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1---------------------------21--1-------------------------------------------------------------------- -----------------11----1111-----------------------11-1--111111-------------------------------------1---------1------------------------------------------------------------------21------22--11-1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 450 STR:RPRED 85.7 SQ:SECSTR ###########################################################HTTccEEEEccccccccccccccccEEEccccTccEEEEccccTTcTTHHHHHHHHHHHHHHHHHHcccccEEcccEEEEEETTccHHHHHHHHHHHHHTcccEEEETHHHccTTEEEEEETTcEEEEHHHHHHHHHHHHHHTTcEEEccccEEEEcccTTcEEEEETTEEEEEEEEEEccGHHHGGGGTEEcccEEEEEEEEEEcccHHHHcGGEEEEEETTEEEEEEcccTTccEEEEEccccEEccTTTTHHHHHHHHHHHHHcGGccEEEEEEEEEEEcTTcccEEEEcETTEEEEEEEEccTTccGGGHHHHHHHHHHHHHHccccccccGGGcccccEEEEGGGccTTcEEEEEEEEEEEEEccHHHHHHHHHHcccGGGcccccccTTcccTTEEEEEcccTTTccccEEEETTTTEEETTTTEEEcTTccEEEccccccccc################ DISOP:02AL 1-2, 425-433| PSIPRED ccccccccccccccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccEEEEEccHHHHHHHHHHHHHHHHccccHHHHcccccccccEEEEEEccccEEcHHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEcccEEEEcEEEEEccccHHHHccHHccEEEEcEEEEEEEcccccccccEEEEcccccEEEEEEEccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccccEEEEEccccccccccccEEcccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHcccccccEEEccccEEEEEEcccccEEEcccEEccccEEEEEcccccEEEccccccEEcccccEEEccccccccccEEEccccccEEEccc //