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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57553.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  59/68 : Bacteria  519/915 : Eukaryota  157/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:421 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->390 3c4qB PDBj 9e-39 34.1 %
:RPS:PDB   1->400 3c48A PDBj 3e-48 30.1 %
:RPS:SCOP  1->390 2bisA1  c.87.1.8 * 2e-49 25.5 %
:HMM:SCOP  1->390 1rzuA_ c.87.1.8 * 2.3e-89 42.1 %
:RPS:PFM   212->365 PF00534 * Glycos_transf_1 1e-24 45.2 %
:HMM:PFM   207->366 PF00534 * Glycos_transf_1 3.6e-41 41.4 152/172  
:HMM:PFM   97->141 PF08323 * Glyco_transf_5 2.1e-06 31.1 45/241  
:BLT:SWISS 2->390 Y496_MYCBO 4e-40 37.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57553.1 GT:GENE BAD57553.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2870174..2871439) GB:FROM 2870174 GB:TO 2871439 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57553.1 LENGTH 421 SQ:AASEQ MKIALVSEHASPLAEPGGPEGGQQLHVAELAAALARRGHSVTVYTRRVDPHTRTEVLTRPGYRVVHVPAGPPEPLPRDRTLPHLGEFGTFLRRHWLTDRPQLVHAHFWMSALAAELAARAFDIPVVVTFHALGTVKRRHQGLADTSPPSRIRFERLIATRARHILATSVDEAVELVRMGVPRFRISVVPSGVDVTAFTPGGAAADRKARHRLLCAGKLLPRKGFDVAVRAMPELPGTELVIAGGAVGDDVADDAETKRLRRLAAECGVGDRVRLLGRVSHSAMPRLYRSADAVLAIPRYEPFGLVALEAMACGRPVVATAVGGMLDAVVDGVTGRFVAPAAPETVARAVRPLLDDDVLRRTWGAAGCERVRERYSWDRVAERTLAVYHRAAPTRDSALARELVDPALSRRAAPARATATAR GT:EXON 1|1-421:0| BL:SWS:NREP 1 BL:SWS:REP 2->390|Y496_MYCBO|4e-40|37.9|375/480| SEG 111->120|alaaelaara| SEG 242->254|aggavgddvadda| SEG 409->420|rraaparatata| BL:PDB:NREP 1 BL:PDB:REP 1->390|3c4qB|9e-39|34.1|367/393| RP:PDB:NREP 1 RP:PDB:REP 1->400|3c48A|3e-48|30.1|382/399| RP:PFM:NREP 1 RP:PFM:REP 212->365|PF00534|1e-24|45.2|146/165|Glycos_transf_1| HM:PFM:NREP 2 HM:PFM:REP 207->366|PF00534|3.6e-41|41.4|152/172|Glycos_transf_1| HM:PFM:REP 97->141|PF08323|2.1e-06|31.1|45/241|Glyco_transf_5| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 1->390|2bisA1|2e-49|25.5|381/437|c.87.1.8| HM:SCP:REP 1->390|1rzuA_|2.3e-89|42.1|375/477|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 2043 OP:NHOMOORG 735 OP:PATTERN 221-1131211121214422151262233523-122221221143-E4637B9-3523361---1-1- 2284943544533389966-69557566666499999899578781322541223331116732853B8671222111----3--1----32-1-1-----11111215----------------11241113261LLLPL233K7856K5542166133112434DDCD3-211---2-1--1531223-32---------21---1-1222-1-1234411-1------691--------------------------------------------------------------------------------11---111-11-3-1111111-1-11223----21--7--4433326-5-3732331--41341121111-224233-122--211221222223-3242253732212334124121A52211114132321221111111134444244------------------------------244212554535536231111336522231234842-1--111232-2-1222-31344-121--1----336747-3532472173224122112362332428373-1------------------1---273---112312----------------21------4445-------113111-11--------1--1--1--11-1-----2111--33211111112111111112-1-111-2--111111111------11111-1-13134-----------------------1--323343-24-1---12212111111111---1111111---11----------------5-1111----------1---------------------------13--12131126- 1-22221-111-111-1--11112-22111111-1--1--111-111-111-11-21-2111111111---111111---1--11111--211----1111-1111111123422221111-22212323B2-323212-211321212121-2-222223222--21215-1314-13M112-172651341221222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 406 STR:RPRED 96.4 SQ:SECSTR cEEEEEcTTccTTccTTcTTccHHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEEETTEEEEEEcccccccccGGGGGGGHHHHHHHHHHHHHHHTcccEEEEHHHHHHHHHHHHHHHTccEEEEccccHHHHcccccHHGGcHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHcccGGGEEEccccccTTTcccccHHHcccccEEEEEEccccGGGcHHHHHHHHHHHTTccEEEEEEccTccEEEEEcccHHHHHHHHTTcTTTEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHTTccEEEEccTTHHHHcccTTTEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccGHHHHH############### DISOP:02AL 391-421| PSIPRED cEEEEEEccccccEEcccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHccccccEEEEcccccccccccccccccccccEEEEEEEEccHHccHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHcccEEEEccccccccHHHHHHHHccccEEEEcccccHHHHccccEEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccHHHHccccccccccccccccccc //