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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57555.1
DDBJ      :             putative anti-anti-sigma factor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:131 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   27->131 1auzA PDBj 6e-13 15.2 %
:RPS:SCOP  27->131 1th8B  c.13.2.1 * 4e-13 15.2 %
:HMM:SCOP  22->132 1auzA_ c.13.2.1 * 9.3e-17 25.2 %
:HMM:PFM   26->127 PF01740 * STAS 2.6e-14 24.5 102/117  
:BLT:SWISS 17->131 Y1365_MYCTU 1e-08 25.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57555.1 GT:GENE BAD57555.1 GT:PRODUCT putative anti-anti-sigma factor GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2874125..2874520 GB:FROM 2874125 GB:TO 2874520 GB:DIRECTION + GB:PRODUCT putative anti-anti-sigma factor GB:PROTEIN_ID BAD57555.1 LENGTH 131 SQ:AASEQ MSVDATISSNHDADPRSPGGRVCAQRVEHRHRCVVIRIEGELDALAQHRFHETLDRATHSDCHAVVVDLRAARFLSIRAAAMLGTVRGEAARHGVDLRVVTGRREIERSLEITGVRSQFPRYPSMRAAMEA GT:EXON 1|1-131:0| BL:SWS:NREP 1 BL:SWS:REP 17->131|Y1365_MYCTU|1e-08|25.2|115/128| RP:PDB:NREP 1 RP:PDB:REP 27->131|1auzA|6e-13|15.2|105/116| HM:PFM:NREP 1 HM:PFM:REP 26->127|PF01740|2.6e-14|24.5|102/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 27->131|1th8B|4e-13|15.2|105/115|c.13.2.1| HM:SCP:REP 22->132|1auzA_|9.3e-17|25.2|111/116|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 80.2 SQ:SECSTR ##########################EEEETTEEEEcccccccTTHHHHHHHHHHHHHcccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHccGGGTcccccGGGTGGG DISOP:02AL 1-3, 8-20, 130-131| PSIPRED ccccccccccccccccccccccEEEEEEEcccEEEEEEEccEEcccHHHHHHHHHHHHHccccEEEEEcccccEEcHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEccccHHHHHcc //