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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57560.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.79.3
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   43->355 3e1yA PDBj 2e-16 15.4 %
:HMM:SCOP  250->356 1dt9A2 d.79.3.2 * 0.00093 28.8 %
:HMM:PFM   257->298 PF03465 * eRF1_3 0.00061 35.7 42/113  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57560.1 GT:GENE BAD57560.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2876870..2877937) GB:FROM 2876870 GB:TO 2877937 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57560.1 LENGTH 355 SQ:AASEQ MLDDMSAIDLRALATRPGPFASAYYDSSHNTEDAARQLALRWRSIAEKLRAAGASESMLDVLAEAAVRGRPDRGRAGHLLIADENEVLVDVELPQPPAREVVRVSELPYVLPLLEARAHRVPHVVAVVDKVGADLYAVDENGGERRRTVRGEDHPVHKVPGGGWSHRTMQTRVEETTRRNLVEVAHDVEELAEAAHAEVIVLAGEVESRAKLHAELGKQHHRVIEVETGGRAAGVDPAALDARVHEVVDECADHRRADALDSFRAALGRADGLAVQGLHETARALADGNVATLLIDTDAVPETTIHLDPRHPEQPRERQADEALPVAAIASGAEITPVHGAQAPADGVGALLRHR GT:EXON 1|1-355:0| SEG 116->134|arahrvphvvavvdkvgad| SEG 181->203|lvevahdveelaeaahaevivla| RP:PDB:NREP 1 RP:PDB:REP 43->355|3e1yA|2e-16|15.4|292/380| HM:PFM:NREP 1 HM:PFM:REP 257->298|PF03465|0.00061|35.7|42/113|eRF1_3| HM:SCP:REP 250->356|1dt9A2|0.00093|28.8|104/146|d.79.3.2|1/1|L30e-like| OP:NHOMO 27 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- ---------------1111-1---1-111111111111---1--1-1-------------11--111-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 310 STR:RPRED 87.3 SQ:SECSTR ##########################################TcHHHHHHHHHHHHHHHHHHTTc##ccccTTcEEEEcccGGccEEEEEEcccccccccEEEEEcccccTTGGGGcccccEEEEEEEccccEEEEEEETTEEEEEEEEcccccc#cccccccccHHHHHHHHHHHHHHHHHTcccccccccccEEEEcTTcHHHHTTcTTccGGGGGcccEEEEccccHHHHTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTcccccEEETTHHHHHHHHcccEEEEEEEEccccccccccccccTTccccccHHHHHHTTcGGGTccEEEEccccHHHccEEEEEccc DISOP:02AL 1-5| PSIPRED ccccHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccEEEEEEcccEEEEHHHcccccccEEEEcccccHHHHHHHHHccccEEEEEEEccccEEEEEEccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccHHHEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcHHHHHHHHHHccEEEEEEEcccccccccccHHHcccccHHHHcccHHHHHHHHccccEEEEcccccccccEEEEEccc //