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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57562.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  831/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:239 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->236 2oqrA PDBj 1e-34 37.6 %
:RPS:PDB   29->234 3bulA PDBj 7e-25 11.2 %
:RPS:SCOP  29->112 1a0oA  c.23.1.1 * 1e-15 32.5 %
:RPS:SCOP  144->235 1oddA  a.4.6.1 * 1e-23 34.8 %
:HMM:SCOP  5->192 1s8nA_ c.23.1.1 * 2.2e-34 32.6 %
:RPS:PFM   29->113 PF00072 * Response_reg 1e-13 46.4 %
:RPS:PFM   161->235 PF00486 * Trans_reg_C 2e-14 50.7 %
:HMM:PFM   8->116 PF00072 * Response_reg 1.8e-32 41.7 108/112  
:HMM:PFM   160->235 PF00486 * Trans_reg_C 4.1e-28 55.3 76/77  
:BLT:SWISS 29->236 REGX3_MYCS2 1e-34 42.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57562.1 GT:GENE BAD57562.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2883701..2884420 GB:FROM 2883701 GB:TO 2884420 GB:DIRECTION + GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD57562.1 LENGTH 239 SQ:AASEQ MRVLSANLMIVDDDDRIRRELREALEDEGYDVSEANEAEDALTYLRSNGAPDVMIVELMLGDMDGFECIREIRRDHDVPIIVISSRDDTHDVVAALEAGADDFVTKPFEIKEISARMRALRRRAKLAAERDAPREVALDAHEEAPLMLDREGGAVRRGDEEIKLTLTEFRLLCELADVPGRVLSRAQLLEKVWDENFFGDERIVDVHMRRLRTKIELDPSDPQIVVTVRGLGYRLDLPK GT:EXON 1|1-239:0| BL:SWS:NREP 1 BL:SWS:REP 29->236|REGX3_MYCS2|1e-34|42.4|203/228| SEG 12->28|ddddrirrelrealede| SEG 115->132|armralrrraklaaerda| BL:PDB:NREP 1 BL:PDB:REP 29->236|2oqrA|1e-34|37.6|202/226| RP:PDB:NREP 1 RP:PDB:REP 29->234|3bulA|7e-25|11.2|206/577| RP:PFM:NREP 2 RP:PFM:REP 29->113|PF00072|1e-13|46.4|84/111|Response_reg| RP:PFM:REP 161->235|PF00486|2e-14|50.7|75/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 8->116|PF00072|1.8e-32|41.7|108/112|Response_reg| HM:PFM:REP 160->235|PF00486|4.1e-28|55.3|76/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 29->112|1a0oA|1e-15|32.5|83/128|c.23.1.1| RP:SCP:REP 144->235|1oddA|1e-23|34.8|92/100|a.4.6.1| HM:SCP:REP 5->192|1s8nA_|2.2e-34|32.6|187/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 7762 OP:NHOMOORG 849 OP:PATTERN -------------------------------------------11-13-1------------------ 7AD7M456778655CCCBB-BG44BBBBBBB9IEGG9GEE9DCE9A6889A7ACE35711IHL6L6GNLO9444455546EC7-33556684-611---5-7111C2B75--------------121311114142JLLNLC5AP4LDMDDD8989975688699A9JHT6563454554434BB54422-95FRRSRSORSGTPUSSPDHBABBSUY89BT6DCA99998bS79989887889998867886A665BB655466677AA655454565898756756666666666666455555555655566534355555QGKXPPPTTSUMQIEZSS8CDAOGC77BEN82aVE99434547686228A54B99944334D9GCFB699F9AD77677777669-99A99E9C6C81C88BB7BEBA87AF59757896898959999999997667E99--------1-11-111111111--111112569447BA6CJMONPIEAAA7KKLLCBCC6EPIL8EBJ12DIJF8CB9KD9DF5FID44368511111116539EK4B943261586332-FAA78AA6598787D47622432322221211111114633944BB5BCAD3B67ECGHE7EBFFFDEDCDEHH--13315------A99D8B9BCCCBCCDAB-CDCBBBBBCDCBCBBBBB9CBCAC867A9AAAAAA9AA9A9AACA99AABB4-AAAAAAAAAAAA--2822222222279I8F323232244443114CB9AC78568B7JILJIPKLALNLKCEHH3212132123799H99999EDDFGHJ98B889994434--71553344--------1-2-------------------------4422335333483 -----------------------------------------------------1-----------------------------------------------1--------------------------------------------------------1----2-1---------122-----1-1--A---1-6---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 211 STR:RPRED 88.3 SQ:SECSTR ############################EEEccccccHHHHHHHHHHHTccEEEEEcccTHHHHHHHHHHHHHHHTEEEEcTTccHHHHHHHTGGGccccEEEcccHHHHHHHHHHHTcTTTHHHHHHHHHHHHHHHHHHTTcccccHHHHHHTcccccGGGcccccccccEEEEEEccHHHHcccHHHHHHTTccccTTGGGGcTTTHHHHHHHHHHHHHHHHHHHHTccccEEcccc DISOP:02AL 1-4, 124-137| PSIPRED ccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHHccccccccEEEEEEccEEEEEccc //