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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57569.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.18
:431 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  325->430 1klxA_ a.118.18.1 * 1e-10 29.8 %
:HMM:PFM   361->385 PF07721 * TPR_4 1.2e-06 32.0 25/26  
:HMM:PFM   393->416 PF07721 * TPR_4 6e-06 41.7 24/26  
:HMM:PFM   111->137 PF01225 * Mur_ligase 0.00092 29.6 27/76  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57569.1 GT:GENE BAD57569.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2891284..2892579) GB:FROM 2891284 GB:TO 2892579 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57569.1 LENGTH 431 SQ:AASEQ MAPDRRDAFSCDEYARAAAPAREAVSSIGREAEGQQMNEPYSQWHQRNSPTDQPLAARYTGAEPILWNGSMVYPMYSDRLPQEPTLLFMSLLSQAPPAGLRGHGLGLAVQDAYIELDGHRLTGVDIWSDALARGVTVELVPTGAAPLFTLTPVWVDQTGAHRCWTGNYGMLVEDIPNDIVALWCSLGEGPPNFANLVVGVATVPAKRTGDAGRDPDADAPAAEEIRAAEETGGAEETGGGTEIGGGEEVGGGDEIRGGKEETRPGAQAVAADPPPAAPPPTHDDLSTVDTDPSLPAVDENATMTMHYVHMASAAGAEPPATGPGHGYRNALYELGTAMYDRGEEAEACGLWAQAAEAGHAGAAYDLAVLLFRRGDHGGAERWWRRAAEYGEFRAMSLLAELLDRRGDHAEARQWRARAAEYAARAGQTLYS GT:EXON 1|1-431:0| SEG 15->24|araaaparea| SEG 209->261|gdagrdpdadapaaeeiraaeetggaeetgggteigggeevgggdeirggkee| SEG 264->280|pgaqavaadpppaappp| SEG 311->324|asaagaeppatgpg| SEG 352->367|aqaaeaghagaaydla| SEG 409->425|aearqwraraaeyaara| HM:PFM:NREP 3 HM:PFM:REP 361->385|PF07721|1.2e-06|32.0|25/26|TPR_4| HM:PFM:REP 393->416|PF07721|6e-06|41.7|24/26|TPR_4| HM:PFM:REP 111->137|PF01225|0.00092|29.6|27/76|Mur_ligase| HM:SCP:REP 325->430|1klxA_|1e-10|29.8|104/0|a.118.18.1|1/1|HCP-like| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 25-49, 247-266| PSIPRED ccccccccccHHHHHHHHcHHHHHHHHHcccccccccccHHHHHHHcccccccccHHHccccccEEEccEEEcccHHccccccHHHHHHHHHHHccccccccccccEEEEEEEEEEcccEEEcHHHHHHHHHcccEEEEEcccccccEEEcHHHccccccccEEcccccccHHHccHHHHHHHHHcccccHHHHHHHHcccccccHHcccccccHHHccHHHHHHHHHHHHccccccccccccccccccccccHHcccccccccccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHcc //