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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57571.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  65/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:160 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->144 2gmyD PDBj 3e-07 26.2 %
:RPS:PDB   34->133 3c1lC PDBj 4e-11 19.6 %
:RPS:SCOP  34->151 2gmyA1  a.152.1.3 * 1e-16 22.0 %
:HMM:SCOP  11->153 2o4dA1 a.152.1.3 * 1.2e-25 31.7 %
:HMM:PFM   22->101 PF02627 * CMD 5.4e-09 23.8 80/85  
:BLT:SWISS 36->149 YDFG_BACSU 8e-06 21.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57571.1 GT:GENE BAD57571.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2893719..2894201 GB:FROM 2893719 GB:TO 2894201 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57571.1 LENGTH 160 SQ:AASEQ MIVDVPAGKDPIGYVWGEMVPGIGPAAAALALAVYEHSTLGLREFEAARLRIAQINGCLFCQDWRTERDGAKVEPEFAEAVTNWRTTEAFDERTRLAAEYADRYATDHHGIDEEFWARMAAHYSQAEIVELSMCLGSWLAFGRLNRVLGLDTACVLPGHS GT:EXON 1|1-160:0| BL:SWS:NREP 1 BL:SWS:REP 36->149|YDFG_BACSU|8e-06|21.2|113/147| SEG 26->33|aaaalala| BL:PDB:NREP 1 BL:PDB:REP 36->144|2gmyD|3e-07|26.2|107/145| RP:PDB:NREP 1 RP:PDB:REP 34->133|3c1lC|4e-11|19.6|97/175| HM:PFM:NREP 1 HM:PFM:REP 22->101|PF02627|5.4e-09|23.8|80/85|CMD| RP:SCP:NREP 1 RP:SCP:REP 34->151|2gmyA1|1e-16|22.0|118/147|a.152.1.3| HM:SCP:REP 11->153|2o4dA1|1.2e-25|31.7|139/0|a.152.1.3|1/1|AhpD-like| OP:NHOMO 68 OP:NHOMOORG 65 OP:PATTERN -------------------------------------------------------------------- ----1---------111----1--11-----111111111-----------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------13-------1111111111111-1111111111--------------1---12------------------------------------------------------------------------------------------------------------------------------------111-111---1---111-1-111-----1---11----------------------1--------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 73.8 SQ:SECSTR #################################H#ccccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHccHHHHHHHHGGGcTcccHHHHHHHHHHHHHHHcGGGccHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHTccc######## DISOP:02AL 155-160| PSIPRED ccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc //