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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57574.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  61/68 : Bacteria  717/915 : Eukaryota  132/199 : Viruses  0/175   --->[See Alignment]
b.80.6c.3.1d.15.12d.87.1
:460 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->452 3cgcA PDBj 2e-75 34.4 %
:RPS:PDB   7->452 3cgcA PDBj 2e-48 31.7 %
:RPS:SCOP  9->209 1vh4A  b.80.6.1 * 4e-23 11.7 %
:RPS:SCOP  182->259 1t0qC  d.15.12.1 * 3e-07 13.9 %
:RPS:SCOP  332->452 1f8wA3  d.87.1.1 * 1e-25 25.6 %
:HMM:SCOP  1->204 1gv4A1 c.3.1.5 * 3.6e-44 33.0 %
:HMM:SCOP  113->331 1mo9A1 c.3.1.5 * 4.7e-31 32.7 %
:HMM:SCOP  332->452 1nhpA3 d.87.1.1 * 4.4e-31 36.4 %
:RPS:PFM   8->279 PF07992 * Pyr_redox_2 8e-15 36.9 %
:RPS:PFM   343->439 PF02852 * Pyr_redox_dim 2e-08 38.3 %
:HMM:PFM   7->295 PF07992 * Pyr_redox_2 3.6e-44 35.7 199/202  
:HMM:PFM   340->441 PF02852 * Pyr_redox_dim 6.9e-23 34.3 99/110  
:BLT:SWISS 8->450 CDR_PYRKO 6e-65 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57574.1 GT:GENE BAD57574.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2895489..2896871 GB:FROM 2895489 GB:TO 2896871 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57574.1 LENGTH 460 SQ:AASEQ MAIMSERLVVIGADATGMAAASQARRMLGPRELKIVVFERGGFTSYSACGIPYWVGGVVTERDALIARTAEEHRARDIDLRMRTEAIELDVAGRRVRTRDLDSGVESWTEYDKLVLATGARPLRPALPGIDAAGVHGVQTLDDGQALIDTLDRTEGRRAVVVGAGYIGVEMAEALIQRGFRVTVLNRSAEPMSTLDPDMGALVRKAMDGMGIEVVGGAEVTGVRTDAHGRVRAVTTADEEYPADVVVLGLGVRPETTLARAAGLPLGEHDGLLTDLSMRVRGHTDIWAGGDCVEVLDLVSGRERHVALGTHANKHGQVIGQVIGGGYATFPGVVGTAVSKVCDLEVARTGLREKEAHAAGLQFVTVTIESTSRSGYYPEAAPMTVKMLAERRTGRLLGVQIVGREGAGKRVDIAAVALTARMTVEQMTALDLGYAPPFSPVWDPVLVAARKASLAVQQRG GT:EXON 1|1-460:0| BL:SWS:NREP 1 BL:SWS:REP 8->450|CDR_PYRKO|6e-65|36.0|431/442| SEG 316->326|gqvigqviggg| BL:PDB:NREP 1 BL:PDB:REP 9->452|3cgcA|2e-75|34.4|439/444| RP:PDB:NREP 1 RP:PDB:REP 7->452|3cgcA|2e-48|31.7|441/444| RP:PFM:NREP 2 RP:PFM:REP 8->279|PF07992|8e-15|36.9|255/275|Pyr_redox_2| RP:PFM:REP 343->439|PF02852|2e-08|38.3|94/110|Pyr_redox_dim| HM:PFM:NREP 2 HM:PFM:REP 7->295|PF07992|3.6e-44|35.7|199/202|Pyr_redox_2| HM:PFM:REP 340->441|PF02852|6.9e-23|34.3|99/110|Pyr_redox_dim| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF02852|IPR004099| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02852|IPR004099| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF02852|IPR004099| GO:PFM GO:0050660|"GO:FAD binding"|PF02852|IPR004099| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02852|IPR004099| RP:SCP:NREP 3 RP:SCP:REP 9->209|1vh4A|4e-23|11.7|188/410|b.80.6.1| RP:SCP:REP 182->259|1t0qC|3e-07|13.9|72/83|d.15.12.1| RP:SCP:REP 332->452|1f8wA3|1e-25|25.6|121/126|d.87.1.1| HM:SCP:REP 1->204|1gv4A1|3.6e-44|33.0|197/0|c.3.1.5|1/2|FAD/NAD(P)-binding domain| HM:SCP:REP 113->331|1mo9A1|4.7e-31|32.7|199/0|c.3.1.5|2/2|FAD/NAD(P)-binding domain| HM:SCP:REP 332->452|1nhpA3|4.4e-31|36.4|121/126|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain| OP:NHOMO 2336 OP:NHOMOORG 910 OP:PATTERN 1111-1333334444213112225411233631111111111122-2--1232223324431111--- --5351133352-372233-38--65444442777767BF232-1131421-438221--43B23496524-1112221-12521---3312-122----1--1231-1----------------11-11-11111111--111322111111-111-1---111121122---1-----1--1211132-14133333313233432363114-333132425421-11-3344443444444444458644413144111-189114443523-43442221112111111211111122222222222222331113333412-5222222232224221222612122-11154222323253335122--3433321121543323341232222322133332-32234333164-422334834445-955223533332311111111132212711-----------1-----------------12345-3431355677625555776766661571A278412343562466465732453111-1-------353552276454131452221232-3737121223513------------------------156333582112-11-11-1412---1-22-43---2412------32221212332233223-332232224233422222332212--1323333333335333433212222---11111111111---111111----44433----1--11111---53425243312-23453343454553434112--1--122-2311111323221-23433111------13------1111111121311112-2-21111111132111---111123-33321- ----1-3----111211112323222211111111111111111112123244812211111-----------1------------11-1521111-1-1211112-1-3545342-11---1134-2------1------1111-2--------2222131-311171-311112222H-11134569244211-211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 460 STR:RPRED 100.0 SQ:SECSTR TTccccEEEEEcccHHHHHHHHHHHHHHccTTcEEEEEcccccccccGGGHHHHHTTccccGGGGccccHHHHHHTTccEEEccEEEEEEETTTTEEEEEETTTccEEEEccEEEEcccEEEccccccTTTccTEEccccHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHTTcEEEEEccGGGTTccccHHHHHHHHHHHHHTTcEEEccccEEEEEEcccEEEEEEEETTEEEEccEEEEcccEEEccGGGTTccccccTTccccccTTccccccTTEEEcGGGccEEcTTTccEEccccHHHHHHHHHHHHHHHTTcccccccccccEEEEETTEEEEEEEccHHHHHHHTccEEEEEEEEEcccTTcTTccEEEEEEEEETTTccEEEEEEEEcccHHHHHHHHHHHHHTTccGGGGGGccccccTTTcccccHHHHHHHHcccTTcccT DISOP:02AL 1-3| PSIPRED cccccccEEEEcccHHHHHHHHHHHHHcccccEEEEEEccccEEccccccHHHHHHHccccHHHHHcccHHHHHHcccEEEEccEEEEEEccccEEEEEEcccccEEEEEEEEEEEEcccEEEEccccccccccEEEEccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEccccEEEEEEccccEEEEEEEEEEEccEEcHHHHHHcccEEcccccEEEccccEEccccccEEEEEEEccccccccccEEEcHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccEEEEEccHHHHHHccccEEEEEEccccccEEccccccEEEEEEEEccccEEEEEEEEccccHHHHHHHHHHHHHccccHHHHHccEEccccccHHHHHHHHHHHHHHHHHHHccc //