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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57579.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  33/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:414 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   49->378 3h2jA PDBj 3e-22 26.7 %
:RPS:PDB   110->292 3bl8B PDBj 7e-04 10.2 %
:RPS:SCOP  78->252 1ivyA  c.69.1.5 * 3e-05 8.3 %
:HMM:SCOP  98->393 1mpxA2 c.69.1.21 * 1.2e-15 23.5 %
:RPS:PFM   149->408 PF03583 * LIP 1e-05 32.4 %
:HMM:PFM   150->216 PF03583 * LIP 2.7e-07 30.6 62/291  
:HMM:PFM   200->290 PF00561 * Abhydrolase_1 0.00027 21.2 80/231  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57579.1 GT:GENE BAD57579.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2899606..2900850 GB:FROM 2899606 GB:TO 2900850 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57579.1 LENGTH 414 SQ:AASEQ MSGVAPDTPPATTAAGTRRMVGSVLAVLLIVLASACGTSRDDGDPAARRGEVVSVTALSAMTDAETAAYLGERQLDTPVRNGVETYRIVYRTVGPLGEETTASGLMVLPRTETERLRVVSYAHGTIVRKDEAPSADGETDRARAIMFAAVGNAAVAPDYLGLGEGPGRHPYAHAPTEASASLDLLRAARDAAADRGRTLESDVYIVGFSQGGQAATALGRELHDNPGTGFRVAALSAISGPYAIREAQTPAALDGGVSPRSAVVYLAYWLTAMNPIYGLYDHPTEAFRQPYADRVESLFDGYHDVLSVGTGLPATPAELLTDRFLAWARQPTGPALRAVTESDGTCEWTTDAPVRLYVSTADRSVAAANTDRCLRSLRGPRVERVDLSPMDHGATGRAGLVQTLAWFDQLVPVG GT:EXON 1|1-414:0| TM:NTM 1 TM:REGION 20->37| SEG 5->17|apdtppattaagt| SEG 21->35|vgsvlavllivlasa| SEG 178->195|asasldllraardaaadr| BL:PDB:NREP 1 BL:PDB:REP 49->378|3h2jA|3e-22|26.7|326/386| RP:PDB:NREP 1 RP:PDB:REP 110->292|3bl8B|7e-04|10.2|177/546| RP:PFM:NREP 1 RP:PFM:REP 149->408|PF03583|1e-05|32.4|238/274|LIP| HM:PFM:NREP 2 HM:PFM:REP 150->216|PF03583|2.7e-07|30.6|62/291|LIP| HM:PFM:REP 200->290|PF00561|0.00027|21.2|80/231|Abhydrolase_1| GO:PFM:NREP 2 GO:PFM GO:0004806|"GO:triglyceride lipase activity"|PF03583|IPR005152| GO:PFM GO:0016042|"GO:lipid catabolic process"|PF03583|IPR005152| RP:SCP:NREP 1 RP:SCP:REP 78->252|1ivyA|3e-05|8.3|169/452|c.69.1.5| HM:SCP:REP 98->393|1mpxA2|1.2e-15|23.5|251/0|c.69.1.21|1/1|alpha/beta-Hydrolases| OP:NHOMO 43 OP:NHOMOORG 33 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1--1-11------------------------1---------------------------------------1--------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1--1-------------------------------------------------------------------------------------------------------------------------1--------11---1--------------1---------------------------------------1---------------------------------------1---1--------------------------------------------------------------------------------------------------------------------------------------111---------------------------------------------------------------------------121221113323----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 330 STR:RPRED 79.7 SQ:SECSTR ################################################TTcEEEEEEEEEEcHHHHHHHHTccccccEEEcEEEEEEEEEEEEcTTccEEEEEEEEEEEEEccccEEEEEEEccccccTTcccccccTTcccTHHHHHTTTcEEEEEccccHHHHccccccccccccHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHccTTTTTccEEEEEccccccTTTccccHHHHHHHHHHHHTcccccHHHHHHHHTTccHHHcccccccTTcccHHHHHHccccccHHHHHHHTccccGGGGGGTccHHHHHHHcTTHHHHHHHTccccccccccEEEEEcTTcccccTHHHHHHHHHHH#################################### DISOP:02AL 1-8| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccccccccccccccccccccccEEEEEEEEEEcccccEEEEEEEEEEEccccccccEEEEccccccccccccccccccccHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHccccccccHHHHcccHHccccccccHHHHHHHHHcccccccccccEEEEEccccccccHHHHHHHHHHHccccccEEEcccccHHHHHHHHHHHHHHHcccccccc //