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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57588.1
DDBJ      :             putative epoxide hydrolase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  99/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:298 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->297 3g02B PDBj 2e-28 33.8 %
:RPS:PDB   4->295 1cqzB PDBj 8e-21 13.4 %
:RPS:SCOP  1->297 1qo7A  c.69.1.11 * 4e-15 22.3 %
:HMM:SCOP  2->298 1qo7A_ c.69.1.11 * 2.9e-56 33.7 %
:RPS:PFM   1->38 PF06441 * EHN 2e-09 55.3 %
:RPS:PFM   46->168 PF05088 * Bac_GDH 7e-04 31.6 %
:HMM:PFM   2->37 PF06441 * EHN 6.9e-13 52.8 36/112  
:HMM:PFM   45->110 PF00561 * Abhydrolase_1 8e-09 27.3 66/231  
:BLT:SWISS 1->293 HYEP_MOUSE 9e-41 37.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57588.1 GT:GENE BAD57588.1 GT:PRODUCT putative epoxide hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2907010..2907906) GB:FROM 2907010 GB:TO 2907906 GB:DIRECTION - GB:PRODUCT putative epoxide hydrolase GB:PROTEIN_ID BAD57588.1 LENGTH 298 SQ:AASEQ MDGQTFHLVHVRSANPAATPLLLNHGWPGSFVEYQRLVPLLTEEFHVVIPSPPGFGFSTPLSGTGWELARTTDACAEIMTRLGYPRFGAHGTDMGSGITGRLAAVYPERVIGTHIGADHRWLGLVGDEFPLPDSLSDDEIAQLAAVRTEAAADRGYLAMQNHRPDTIGAALTDSPVGQLAWIAEQFKTRPVGDHRTPDQSVDRDQLLTNISLYWFTRSGASSAQFYYECKHSDLDLLMASGVPSGWAVFDTHPLIRRVLDPGQAIGQWSEFTEGGHFPAMEEPELLADDIRAFFRRIP GT:EXON 1|1-298:0| BL:SWS:NREP 1 BL:SWS:REP 1->293|HYEP_MOUSE|9e-41|37.2|293/455| BL:PDB:NREP 1 BL:PDB:REP 1->297|3g02B|2e-28|33.8|278/380| RP:PDB:NREP 1 RP:PDB:REP 4->295|1cqzB|8e-21|13.4|292/541| RP:PFM:NREP 2 RP:PFM:REP 1->38|PF06441|2e-09|55.3|38/110|EHN| RP:PFM:REP 46->168|PF05088|7e-04|31.6|98/1516|Bac_GDH| HM:PFM:NREP 2 HM:PFM:REP 2->37|PF06441|6.9e-13|52.8|36/112|EHN| HM:PFM:REP 45->110|PF00561|8e-09|27.3|66/231|Abhydrolase_1| GO:PFM:NREP 3 GO:PFM GO:0004301|"GO:epoxide hydrolase activity"|PF06441|IPR010497| GO:PFM GO:0009636|"GO:response to toxin"|PF06441|IPR010497| GO:PFM GO:0016020|"GO:membrane"|PF06441|IPR010497| RP:SCP:NREP 1 RP:SCP:REP 1->297|1qo7A|4e-15|22.3|287/385|c.69.1.11| HM:SCP:REP 2->298|1qo7A_|2.9e-56|33.7|285/0|c.69.1.11|1/1|alpha/beta-Hydrolases| OP:NHOMO 491 OP:NHOMOORG 217 OP:PATTERN ----------------------------------------------1--------------------- ----5----------11----3--15------32331-33-72335---1--1----3--221-2-21-21----------------------------------3-------------------------------11------1-1-----------1-------1-----------------------------------------1----------------------1---------------------------------------------------------------------------------------------11-----------------------------------------------11111-----1-6---------------------------1-1-12-2---22158442-2-1--1------11------------1--------------------------------11131-----11123211------43------422--4-------------2-2--2----1------------------------------------1--2111-------------------------------------1---1-------------------------------------------------------------------------1------------------------------------------------------------------------------------1-------2----------------------------------------------------------------------------------------------------------- ------1--------88743241535312-111111--------11326F63A822421111----1---------11-2---------493846-1-112-3221---1A181121111-11123121251-121--1121111-111-11-112222112-1-15332-2212---------22---3------2-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 100.0 SQ:SECSTR ETTcccccEEEEEEEccccEEEEEccTTccGGGGGGHHHHHHHTcEEEEEEcTTcTTccccccGGGcHHHHHHHHHHHHHHHTcccEEEEEETHHHHHHHHHHHHccTTEEEEEEccccccTTccHHHHHHHcGGGHHHHHHTcTTHHHHHHHHTHHHHHHHHcccTTccccccTTTTTTTTcccccccccccccccccHHHHHHHHHHHHHHTTHHHHTTGGGHHHHHHHHGGGTTccccccEEEEEETccGGGGTTGGGTcTTcEEEEEccccccHHHHcHHHHHHHHHHHHHGGc DISOP:02AL 298-299| PSIPRED cccEEEEEEEEEcccccccEEEEEccccccHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccccEEEcccccccHHHHHHHcccEEEEEEEccccccHHHHcHHHHHHHHHHHHHccc //