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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57591.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.71.1
:245 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   101->242 1cz3B PDBj 2e-11 22.2 %
:RPS:SCOP  101->241 1cz3A  c.71.1.1 * 1e-11 20.1 %
:HMM:SCOP  57->242 8dfrA_ c.71.1.1 * 3e-21 28.1 %
:RPS:PFM   166->234 PF01872 * RibD_C 3e-04 35.8 %
:HMM:PFM   59->234 PF01872 * RibD_C 1.9e-17 24.7 166/200  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57591.1 GT:GENE BAD57591.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2909184..2909921) GB:FROM 2909184 GB:TO 2909921 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57591.1 LENGTH 245 SQ:AASEQ MLPLGTPQVVDRVPVGTGIASTFERCRLSGREMSSAVDSRLYSCTHPEPEELIMTVTYTFDVFSSLDGFGGVSGGDWGGYWGKQGPELLDHRLGLYEAPQRMVFGANTYRVFTQLLAAGTEETVRDPWVERMRNLPATVVSTTLEGPLDWPDATVAAGDAVDVVARLKEESEVPLRSHGSLSMNRALMAAGLVDRVQITIFPVVTGRTGDDPIFRGAADFDLELLESRTLDGNIQELVYRPTLHP GT:EXON 1|1-245:0| SEG 68->85|gfggvsggdwggywgkqg| SEG 152->165|datvaagdavdvva| RP:PDB:NREP 1 RP:PDB:REP 101->242|1cz3B|2e-11|22.2|135/168| RP:PFM:NREP 1 RP:PFM:REP 166->234|PF01872|3e-04|35.8|67/198|RibD_C| HM:PFM:NREP 1 HM:PFM:REP 59->234|PF01872|1.9e-17|24.7|166/200|RibD_C| GO:PFM:NREP 2 GO:PFM GO:0008703|"GO:5-amino-6-(5-phosphoribosylamino)uracil reductase activity"|PF01872|IPR002734| GO:PFM GO:0009231|"GO:riboflavin biosynthetic process"|PF01872|IPR002734| RP:SCP:NREP 1 RP:SCP:REP 101->241|1cz3A|1e-11|20.1|134/164|c.71.1.1| HM:SCP:REP 57->242|8dfrA_|3e-21|28.1|167/0|c.71.1.1|1/1|Dihydrofolate reductase-like| OP:NHOMO 17 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----2--------------------1----------2121-----1------11------------1-11------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 201 STR:RPRED 82.0 SQ:SECSTR ########################################EEEEEEEEEEccccccccccTTccccccEEEcTTccccccc####cccccccccHTTcccHHHHHHHHHHHcEEEEEHHHHHHHccccTTcEEcccEEEEEcccccccccTTEEEEcccHHHHHHHHHTTTccEEEEEEcHHHHHHHHHTTcccEEEEEEcccccccccEEccccccccccEEEEEEEEcccccEcEEEEEEccc DISOP:02AL 1-4, 242-245| PSIPRED ccccccHHHHHcccccccHHHHHHHHHcccHHHHHHHHccEEEEccccHHHHcccEEEEEEEEEEEEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEcccHHHHHHHHcccccccccccccHHHHccccEEEEEcccccccccccEEEEcccHHHHHHHHHHccccEEEEEccHHHHHHHHHcccccEEEEEEEEEEEcccccccccccccccEEEEEEEEEccccEEEEEEEEcccc //