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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57599.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  76/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.15
:290 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->281 3ju2A PDBj 2e-48 43.1 %
:RPS:PDB   89->261 3bzgA PDBj 5e-17 18.4 %
:RPS:SCOP  20->284 1i60A  c.1.15.4 * 5e-41 18.9 %
:HMM:SCOP  18->261 1dxiA_ c.1.15.3 * 3.6e-52 32.9 %
:HMM:PFM   38->224 PF01261 * AP_endonuc_2 5e-28 28.2 177/211  
:BLT:SWISS 144->284 IOLI_BACSU 1e-04 26.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57599.1 GT:GENE BAD57599.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2914547..2915419) GB:FROM 2914547 GB:TO 2915419 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57599.1 LENGTH 290 SQ:AASEQ MTSVAAQHLPYDLTDPYRSLSLNTATTKRWTLAEAVDGAARAGLGAIGLWRDRVHEVGVAAAAKLVADAGLRVSSLCRGGFLTAPGDGQSALDDNRRAIDEAAALGTRELVMVMGGIADRDLAAARARVEERLALLAPYAAERGVRLALEPLHPMFCADRAVISTLAQALTMARPYPAETVGVVVDTFHLWWDPLLEDQIAQAGAEGRISSYQVCDWLNPMAADPLLSRGMMGDGVIDFATIGGWVRAAGYRGDVEVEIFNAAVWEADGHSVIETMKQRYRELVLPALVG GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 144->284|IOLI_BACSU|1e-04|26.7|135/278| SEG 38->49|gaaraglgaigl| SEG 57->71|vgvaaaaklvadagl| SEG 118->137|adrdlaaararveerlalla| BL:PDB:NREP 1 BL:PDB:REP 20->281|3ju2A|2e-48|43.1|260/275| RP:PDB:NREP 1 RP:PDB:REP 89->261|3bzgA|5e-17|18.4|152/277| HM:PFM:NREP 1 HM:PFM:REP 38->224|PF01261|5e-28|28.2|177/211|AP_endonuc_2| RP:SCP:NREP 1 RP:SCP:REP 20->284|1i60A|5e-41|18.9|259/278|c.1.15.4| HM:SCP:REP 18->261|1dxiA_|3.6e-52|32.9|240/388|c.1.15.3|1/1|Xylose isomerase-like| OP:NHOMO 80 OP:NHOMOORG 77 OP:PATTERN -------------------------------------------------------------------- ----1--------------------1----------1--1---1111-----111--------11-11111------------------------------------1-------------------------------11--------------------------------------------------------------------1------------1--------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1--------------------1------2------111-111112121-----------1--11111111---1-----------------------------------------------1---------1----------------------------11--------------------------------------------------------------------------------------------------------------------------------------1-11111--1-1111-1--1-11-111-------------------------1--111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 269 STR:RPRED 92.8 SQ:SECSTR ###################EEEEGGGGTTTcHHHHHHHHHHTTccEEEccHHHHHHHcHHHHHHHHHHTTccEEEEcGccTTcccHHHHHHHHHHHHHHHHHHHTTcTTcEEEEEccEEccccccHHHHHHHHHHHHHTcHHHHTTEEEEcccccccHHHccccHHHHHHHHHHHHHHHTccEEEEHHHHHHTccHHHHHHHHGGGccccEEEEccccTTcccccccccTTcccccccHHHHHHHHHHccccEEEEEccTTccccTTccHHHHHHHHHHHHHHHHHHH## DISOP:02AL 1-6| PSIPRED ccccccHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHcccEEEccccccccccHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHcccccEEEEEEEccccccccccccccccccccEEcHHHHHHHHHHccccEEEEEEEEccHHHHccHHHHHHHHHHHHHHHHHHHccc //