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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57600.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  60/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   62->346 3e96B PDBj 2e-17 14.3 %
:RPS:SCOP  62->342 1dhpA  c.1.10.1 * 3e-16 14.6 %
:HMM:SCOP  60->343 1xxxA1 c.1.10.1 * 1e-08 22.3 %
:RPS:PFM   15->394 PF06187 * DUF993 e-117 61.4 %
:HMM:PFM   11->394 PF06187 * DUF993 2e-184 62.4 380/382  
:BLT:SWISS 175->320 DAPA_THENV 2e-04 35.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57600.1 GT:GENE BAD57600.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2915416..2916606) GB:FROM 2915416 GB:TO 2916606 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57600.1 LENGTH 396 SQ:AASEQ MTATATGASVLLPVDGRFEPYALGAPGAWTRPTRPISSRVAFAAAHVIPRSTADNTPGAPAEINWDATLAYRHELWSYGLGVADAMDTAQRGMGLDWHATAELIRRSGREAASAGGRLACGAGTDQLDLAALPSGAAGLARIVDAYREQVAVVSEAGAQVILMASRALAQVARSAADYAYVYERVLADVERPVILHWLGTMFDPALHGYWGSADIDAATEAFRTLVANNRAKIDGVKVSLLDAAHEVALRRALPDGVRLYTGDDFNYPELIVGDAHGHSDALLGIFAAIYPAASTALQELDNGNTARAAEIFSATQDLGRHIFAAPTYYYKTGIAFLSWLNGRQAGFSMVGGLSTGRSVPHLIEVFRLADRAGLLSDPQLAAHRMRIYLEVNGLVS GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 175->320|DAPA_THENV|2e-04|35.7|126/100| SEG 127->140|ldlaalpsgaagla| RP:PDB:NREP 1 RP:PDB:REP 62->346|3e96B|2e-17|14.3|245/300| RP:PFM:NREP 1 RP:PFM:REP 15->394|PF06187|e-117|61.4|376/382|DUF993| HM:PFM:NREP 1 HM:PFM:REP 11->394|PF06187|2e-184|62.4|380/382|DUF993| RP:SCP:NREP 1 RP:SCP:REP 62->342|1dhpA|3e-16|14.6|246/292|c.1.10.1| HM:SCP:REP 60->343|1xxxA1|1e-08|22.3|247/0|c.1.10.1|1/1|Aldolase| OP:NHOMO 65 OP:NHOMOORG 60 OP:PATTERN -------------------------------------------------------------------- ----1--------------------2----------1--1----111-----111---------1-11111--------------------------------------------------------------------11--------------------------------------------------------------------1------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------11111111111------1---1--111-112111231-----1-----1--11111111---------------------------------------------------1---------1----------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 318 STR:RPRED 80.3 SQ:SECSTR #######################################################ccEETTcccHHHHHHHHHHHHTTTccEEcTTcTTTTGGGccHTHHHHHHHHHHHHHHHHTTccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccEEEEcccccccccccHHHHHHHHHHHHHHHcccEEEEEccTTccTHHEEcHHHHcccccHHHHHHHTTccTTTEEEEEEccccHHHHHHHHTTccGccEEEETcTTTHHHHHHHTccEEEEcGGGTcHHHHHHHHHHHHTHHTTcHHHHHHHHHHHHHHHHHHTTTTTTTTTHHHHHHHHHTTccccTTcccc##ccccHHHHHHHHHHHHHTTcc##################### DISOP:02AL 1-6| PSIPRED ccccccccEEEccccccccEEEcccccccccccccccccEEEEEEHHcccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEEccHHccHHHccccccccHHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHcccccEEEEccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccc //