[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57601.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  142/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.81.1
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->291 2glxA PDBj 3e-14 26.8 %
:RPS:PDB   11->384 3ec7A PDBj 6e-32 15.5 %
:RPS:SCOP  11->168 1zh8A1  c.2.1.3 * 6e-15 18.6 %
:RPS:SCOP  149->306 1zh8A2  d.81.1.5 * 3e-23 22.5 %
:HMM:SCOP  11->178 1ofgA1 c.2.1.3 * 3.5e-29 35.7 %
:HMM:SCOP  151->352 2nvwA2 d.81.1.5 * 6.9e-30 28.2 %
:RPS:PFM   12->130 PF01408 * GFO_IDH_MocA 1e-08 40.8 %
:HMM:PFM   12->144 PF01408 * GFO_IDH_MocA 6.4e-15 31.4 118/120  
:HMM:PFM   177->269 PF02894 * GFO_IDH_MocA_C 6.6e-08 21.6 88/115  
:BLT:SWISS 55->291 AFR_ENSAD 8e-13 26.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57601.1 GT:GENE BAD57601.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2916603..2917769) GB:FROM 2916603 GB:TO 2917769 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57601.1 LENGTH 388 SQ:AASEQ MPDSPTPPRLLRIAMNGVTGRMGYRQHLMRSILPIRDAGGLLLADGTRVQVEPILVGRNAAKLAELAEQHGIAEWSTDAAAVLADPSVDIYFDAQVTSRRADALATAMKAGKHVFTEKPTAETLTEAVELARVAADTGVTAGVVHDKLYLPGLVKLRRLVDEGFFGRILSLRGEFGYWVFEGDGQPAQRPSWNYRAEDGGGIVVDMFCHWNYVLEGLLGKVEAVTAKATTHIPTRWDEQGNPYQATADDAAYGIFEMENGVIAQINSSWAVRVYRDELVEFQIDGTHGSAVAGLRKCVAQHRSHTPKPVWNPDLPVTERFRDQWLEVPANAELDNGFKLQWEEFLTDVVNRRPHRYGMLSAARGVQLAELGLRSSAEGRRIEVPEVTL GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 55->291|AFR_ENSAD|8e-13|26.8|220/333| SEG 131->144|arvaadtgvtagvv| BL:PDB:NREP 1 BL:PDB:REP 55->291|2glxA|3e-14|26.8|220/332| RP:PDB:NREP 1 RP:PDB:REP 11->384|3ec7A|6e-32|15.5|316/328| RP:PFM:NREP 1 RP:PFM:REP 12->130|PF01408|1e-08|40.8|103/119|GFO_IDH_MocA| HM:PFM:NREP 2 HM:PFM:REP 12->144|PF01408|6.4e-15|31.4|118/120|GFO_IDH_MocA| HM:PFM:REP 177->269|PF02894|6.6e-08|21.6|88/115|GFO_IDH_MocA_C| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01408|IPR000683| RP:SCP:NREP 2 RP:SCP:REP 11->168|1zh8A1|6e-15|18.6|145/181|c.2.1.3| RP:SCP:REP 149->306|1zh8A2|3e-23|22.5|142/144|d.81.1.5| HM:SCP:REP 11->178|1ofgA1|3.5e-29|35.7|154/220|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 151->352|2nvwA2|6.9e-30|28.2|188/0|d.81.1.5|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| OP:NHOMO 242 OP:NHOMOORG 151 OP:PATTERN ----------------12---------1---------------------------------------- 1-3-2----------2---------1--------1-11--21--114--112123--1-----13-11111-----------2-----1111-1-------1---1-5-1-------------------1----11---33-----1-1111-----1---1-1-----1--1-----1-----1-----12---------1-------4211-11---12-2--------16-11-1--1--111-----------------------------------------------------------------------------1----------------------11---1-1--11---1----11211----2---------1-21---------22222222223---------13--5442325454421--1--2-----------------22------------------------------------------------1-1---------------------------1--------12----------------1-1-------------------------------11----------------------------------1-------------------------------------------------------------------------------1---------------------------------------------------------1-------------------------11----12-1--------1-------------------------------------------------------------------------------------1---------2- -------------1----------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------111-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 388 STR:RPRED 100.0 SQ:SECSTR ccccccccccEEEEEEcEccHHHccHHHHHHHHTcTTEEEEEEEcTTTTEEEEEEEcccTTHHHHHHHHHTccEEEccHHHHHHcTTccEEEEcccGGGHHHHHHHHHHTTcEEEEEccccccHHHHHHHHHHHHHHHTccEEEEcGGGcHHHHHHHHHHHHTTTccEEEEEEEEcccccccEEETTccTTccGcTTcTTHHHHTTHHHHHHHHHHHTccEEEEEEEcccccTTcccEEEEEEEcccccccEEEEEETTccEEEEEEETTcccccEccEEEEEEEcccEEcccccccEEEETTEEEEcccccGGGTccTTccHHHHHHHHHHcHHHHHHHHHHHHHHHHTcccccccHHHHHHHHHHHHHHHHHHHHcccEEccGGGc DISOP:02AL 1-6, 8-9| PSIPRED cccccccccEEEEEEEEcccHHHHHHHHHHHHHHHccccEEEEccccccEEEEEEEcccHHHHHHHHHHcccccccccHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHccccccEEEEEEEEccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccccccccEEEEEEEEcccEEEEEEEEEcccccccccEEEEEEEcccEEEEcccccEEEccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccEEEEccccc //