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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57614.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.90.1
:333 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   13->131 1bkjA PDBj 3e-06 10.9 %
:RPS:SCOP  14->39 2b67A1  d.90.1.1 * 7e-05 38.5 %
:RPS:SCOP  148->330 1ywqA1  d.90.1.1 * 6e-04 8.3 %
:HMM:SCOP  11->332 2freA1 d.90.1.1 * 2.6e-07 25.9 %
:HMM:PFM   13->38 PF00881 * Nitroreductase 3.3e-05 38.5 26/165  
:HMM:PFM   237->308 PF00881 * Nitroreductase 4.9e-07 25.0 68/165  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57614.1 GT:GENE BAD57614.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2936401..2937402) GB:FROM 2936401 GB:TO 2937402 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57614.1 LENGTH 333 SQ:AASEQ MTDNDARAPIPVPDQQTLLAVMRRAARAPSLHNTQPWRWEFDGRELRLFRDDDRLLDAADPNGRQLVISCGAMLHHVRTAFAAAGWHTDTKRLPAPDRPDLLAALTFRPWPDPPPGVRVRAEAIDHRRTDRLPLDPPPDLGGLEHIARKLADPHDVTVGVLDETAPARLAAASEHSTALRHYDMPYQAELRWWTGHEHGEHGVPAHALASPDEAARVPVGRPFPPAGPSARRGDQPDRAGLLVLSTAGDTVSSWLHAGEALSAILLECTADGLATCPLTHITELATTRQLLANLAGRAGVPQVVVRVGVAPGNEDHVPTPRRRPDEFLTVLGG GT:EXON 1|1-333:0| SEG 44->57|relrlfrdddrlld| SEG 132->143|lpldpppdlggl| SEG 295->312|agragvpqvvvrvgvapg| RP:PDB:NREP 1 RP:PDB:REP 13->131|1bkjA|3e-06|10.9|119/230| HM:PFM:NREP 2 HM:PFM:REP 13->38|PF00881|3.3e-05|38.5|26/165|Nitroreductase| HM:PFM:REP 237->308|PF00881|4.9e-07|25.0|68/165|Nitroreductase| RP:SCP:NREP 2 RP:SCP:REP 14->39|2b67A1|7e-05|38.5|26/201|d.90.1.1| RP:SCP:REP 148->330|1ywqA1|6e-04|8.3|180/199|d.90.1.1| HM:SCP:REP 11->332|2freA1|2.6e-07|25.9|143/0|d.90.1.1|1/1|FMN-dependent nitroreductase-like| OP:NHOMO 111 OP:NHOMOORG 50 OP:PATTERN -------------------------------------------------------------------- --------------13333-33--5433333246662223-112----------------221-2-5-11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------1--1----11111111111-1-1---------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 119 STR:RPRED 35.7 SQ:SECSTR ############ccHHHHHHHHHHHHTcccGGGcccEEEHHTTccTHHHHccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHTTcEEEEEGGGGGGHHHHHHHTTccTTEEEEEEEEEEccccccccccc########################################################################################################################################################################################################## DISOP:02AL 1-7, 316-319| PSIPRED ccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccEEEEEEEccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccHHHcccccccHHHHHHHHHcccccccHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccccHHHEEEEccc //