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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57616.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  38/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:415 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->403 1pv7A_ f.38.1.2 * 5.4e-28 24.4 %
:RPS:PFM   73->324 PF05977 * DUF894 1e-09 30.9 %
:HMM:PFM   18->310 PF07690 * MFS_1 2.9e-19 25.5 286/353  
:HMM:PFM   256->407 PF07690 * MFS_1 6.7e-06 21.5 144/353  
:BLT:SWISS 66->224 YFIS_BACSU 9e-07 26.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57616.1 GT:GENE BAD57616.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2937977..2939224) GB:FROM 2937977 GB:TO 2939224 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD57616.1 LENGTH 415 SQ:AASEQ MGGGSVRHVLAHPVFRRLFAAQAVALAGTGLLTVALGLLAYDLAGSAAGAVLGTALAIKMAAYVGVAPVITALIERLPRRTILVAADTVRATVALLLPAVDEVWQIYALIVVLQAASATFTPTFQAIIPAVLPDERDYTRALSLSRLAYDLEALLSPLLAAAVLTVAGYHWLFLGTVGGFAVSALLVTTTPLPAAACVRPQPLTSRVLAGARILTTRPVLRGLLAMNMTVAAGTALVLVDTVVYVRDVLGGTDVGVALATGCFGAGSMTAALLVPRLLRTCTDRTLMLTGAALVPIALTVTAGWLAIGARPGLGWGVLGGCWFVLGAGTALVNTPAARLLRAQAGESELPAVFSAQFSLSHACFLLTYPIAGWLGVRAGHAVPAGLLAVLATLATSTAARLWPAGPPIGAVPARR GT:EXON 1|1-415:0| BL:SWS:NREP 1 BL:SWS:REP 66->224|YFIS_BACSU|9e-07|26.6|158/417| TM:NTM 9 TM:REGION 19->41| TM:REGION 55->77| TM:REGION 94->116| TM:REGION 158->180| TM:REGION 222->244| TM:REGION 254->276| TM:REGION 285->307| TM:REGION 311->333| TM:REGION 378->400| SEG 14->40|vfrrlfaaqavalagtglltvalglla| SEG 147->167|laydleallspllaaavltva| SEG 236->249|lvlvdtvvyvrdvl| SEG 378->401|aghavpagllavlatlatstaarl| RP:PFM:NREP 1 RP:PFM:REP 73->324|PF05977|1e-09|30.9|246/402|DUF894| HM:PFM:NREP 2 HM:PFM:REP 18->310|PF07690|2.9e-19|25.5|286/353|MFS_1| HM:PFM:REP 256->407|PF07690|6.7e-06|21.5|144/353|MFS_1| HM:SCP:REP 1->403|1pv7A_|5.4e-28|24.4|385/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 41 OP:NHOMOORG 38 OP:PATTERN -------------------------------------------------------------------- ------------------------------------21-1------------1-2-----11--1--------------------------------------1------------------------------------------2--1--------------1---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--111-1---------1---11---------1--111-----------------------------------------------------------------------------------1--1------1--1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----1-1--------1---------------------1------1---------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 190-207, 409-411, 413-415| PSIPRED ccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccc //