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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57623.1
DDBJ      :             putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  82/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.32.1
:384 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->368 1q0oA PDBj e-164 79.1 %
:RPS:PDB   35->368 3ecjB PDBj 5e-48 79.0 %
:RPS:SCOP  35->165 1f1rA1  d.32.1.3 * 2e-15 77.1 %
:RPS:SCOP  168->342 1f1rA2  d.32.1.3 * 5e-20 83.4 %
:HMM:SCOP  24->151 1f1xA1 d.32.1.3 * 1.9e-29 37.5 %
:HMM:SCOP  170->379 1q0oA2 d.32.1.3 * 2.4e-40 28.6 %
:RPS:PFM   172->287 PF00903 * Glyoxalase 2e-05 31.0 %
:HMM:PFM   38->144 PF00903 * Glyoxalase 4.9e-10 26.2 107/128  
:HMM:PFM   172->288 PF00903 * Glyoxalase 1.8e-17 25.2 115/128  
:BLT:SWISS 34->322 BPHC_BACPJ 5e-34 31.6 %
:PROS 266->287|PS00082|EXTRADIOL_DIOXYGENAS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57623.1 GT:GENE BAD57623.1 GT:PRODUCT putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2944712..2945866) GB:FROM 2944712 GB:TO 2945866 GB:DIRECTION - GB:PRODUCT putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase GB:PROTEIN_ID BAD57623.1 LENGTH 384 SQ:AASEQ MSERTLTSSGFYVSQEAPIAAANPVPTPAAPPPDILRVAYAELVVTDLAASREFYVDVLGLTVTAEDEDAIYLRTLEEFIHHNLVLRRGPVAALAALSYRVRSPEDLDKAVAFYTELGCRVERRAEGFTKGIGDSVRVEDPLGFPYEFFHDTTHVERLAWRYDLYTPGALVRLDHFNQVTPDVPRAVKHYQDLGFRVTEDIQDQEGTTYAAWMRRKPTVHDTAATGGDGPRLHHVAFSTHEKHNILAICDKLGALRLSDRIERGPGRHGVSNAFYLYLRDPDGHRIEIYTQDYYTGDPDNPVVTWDVHDNQRRDWWGTPVVPSWYTDASLVLDLDGNPQPVVARKESSELEVTIGADGFSYTREQGQDDLPEWKKGEYKLGHQL GT:EXON 1|1-384:0| BL:SWS:NREP 1 BL:SWS:REP 34->322|BPHC_BACPJ|5e-34|31.6|288/315| PROS 266->287|PS00082|EXTRADIOL_DIOXYGENAS|PDOC00078| SEG 17->33|apiaaanpvptpaappp| BL:PDB:NREP 1 BL:PDB:REP 34->368|1q0oA|e-164|79.1|335/356| RP:PDB:NREP 1 RP:PDB:REP 35->368|3ecjB|5e-48|79.0|334/359| RP:PFM:NREP 1 RP:PFM:REP 172->287|PF00903|2e-05|31.0|113/120|Glyoxalase| HM:PFM:NREP 2 HM:PFM:REP 38->144|PF00903|4.9e-10|26.2|107/128|Glyoxalase| HM:PFM:REP 172->288|PF00903|1.8e-17|25.2|115/128|Glyoxalase| RP:SCP:NREP 2 RP:SCP:REP 35->165|1f1rA1|2e-15|77.1|131/145|d.32.1.3| RP:SCP:REP 168->342|1f1rA2|5e-20|83.4|175/176|d.32.1.3| HM:SCP:REP 24->151|1f1xA1|1.9e-29|37.5|128/0|d.32.1.3|1/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| HM:SCP:REP 170->379|1q0oA2|2.4e-40|28.6|210/0|d.32.1.3|2/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| OP:NHOMO 137 OP:NHOMOORG 92 OP:PATTERN ------2121121221---------------------------------------------------- -----1---------------------------2222-35-----1------121112----1----11-------------2-----------------------------------------------------11111----6-------------------------------------11112---2----------1----------------11-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1311---1-11-11-1111--1----------3---4--2-12111--------1-1-1--11-----------------------------------------------22--1------1--1---------------211-111--11-12-2------1--------------------33------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3------------1------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 340 STR:RPRED 88.5 SQ:SECSTR #################################cEEEEEEEEEEEccHHHHHHHHTTTTccEEEEEcccEEEEEcTTccccccEEEEEccccEEEEEEEEEccTHHHHHHHHHHHHTTccEEEETTcccTTcccEEEEEcTTccEEEEEcccccccccTTcTTTccTTcccEEEEEEEEEccHHHHHHHHHHTTcEEEEEEEcTTccEEEEEEEcccccccEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHTTcGGGEEEEEEEccTTccEEEEEEcTTccEEEEEEcccccccTTcccEEEETTcTTcccTTcccccHHHHHcccccccTTcccccccccccccHHHHHTcTTcEEcccTTccTcTTcE########### DISOP:02AL 1-6, 8-9, 367-370| PSIPRED ccccEEcccccEEEccccccccccccccccccccEEEEEEEEEEEccHHHHHHHHHHHcccEEEEEcccEEEEEEcccccccEEEEEcccccccEEEEEEEccHHHHHHHHHHHHHcccEEEEcccccccccEEEEEEEcccccEEEEEEccccccccccccccccccEEEcccEEEEEEccHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEcccccEEEEEccccccEEEEEEEEccHHHHHHHHHHHHHcccccEEEEccccccccccEEEEEEcccccEEEEEEcccEEEccccccEEEEcccccccccccccccHHHHHHccccccccccccEEEEccccccEEEEEcccccEEccccccccccccccccEEccccc //