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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57624.1
DDBJ      :             putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  799/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.82.1
:500 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->500 2d4eC PDBj e-111 48.4 %
:RPS:PDB   9->492 3ek1A PDBj e-122 32.6 %
:RPS:SCOP  1->496 1a4sA  c.82.1.1 * e-113 34.7 %
:HMM:SCOP  13->495 1bi9A_ c.82.1.1 * 2.8e-167 45.3 %
:RPS:PFM   41->473 PF00171 * Aldedh 6e-87 45.3 %
:HMM:PFM   26->486 PF00171 * Aldedh 1.1e-173 47.6 458/462  
:BLT:SWISS 16->476 HPCC_ECOLX e-108 46.7 %
:PROS 289->300|PS00070|ALDEHYDE_DEHYDR_CYS
:PROS 261->268|PS00687|ALDEHYDE_DEHYDR_GLU
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57624.1 GT:GENE BAD57624.1 GT:PRODUCT putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2945904..2947406) GB:FROM 2945904 GB:TO 2947406 GB:DIRECTION - GB:PRODUCT putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GB:PROTEIN_ID BAD57624.1 LENGTH 500 SQ:AASEQ MADSAGHHVPAELPDRIRHYIDGAFVDSVDGDTFDVLDPVTNETYVQAAAGKKADIDRAVAAARKAFTEGPWPKLLPRERSRVLHRIADLVESRDARLAELESFDSGLPITQALGQARRAAENFRFFADLIVAQSDDTYKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPALATGNTVVLKPAEFTPLSASLWAGIFEEAGLPQGVFNLVNGLGEEAGDALVKHPEVPLISFTGESRTGQIIFANAAPHLKGLSMELGGKSPAVVFADADLDAAIDATIFGVFSLNGERCTAGSRILVQREIYDEFVERYAAQAERVKVGYPHDPATEVGALVHPEHYAKVTEYIEIGKSEARLVAGGDRPAEFPTGNFVRPTVFADVKPDARIFQEEIFGPVVAITPFDTEEEALELANGVKYGLAAYIWTNDLKRAHNFSQAVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRSIDFYTDQQAVHITLGKVHNPTFGK GT:EXON 1|1-500:0| BL:SWS:NREP 1 BL:SWS:REP 16->476|HPCC_ECOLX|e-108|46.7|454/468| PROS 289->300|PS00070|ALDEHYDE_DEHYDR_CYS|PDOC00068| PROS 261->268|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| SEG 117->128|arraaenfrffa| SEG 273->283|adadldaaida| BL:PDB:NREP 1 BL:PDB:REP 19->500|2d4eC|e-111|48.4|479/515| RP:PDB:NREP 1 RP:PDB:REP 9->492|3ek1A|e-122|32.6|478/485| RP:PFM:NREP 1 RP:PFM:REP 41->473|PF00171|6e-87|45.3|428/440|Aldedh| HM:PFM:NREP 1 HM:PFM:REP 26->486|PF00171|1.1e-173|47.6|458/462|Aldedh| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590| RP:SCP:NREP 1 RP:SCP:REP 1->496|1a4sA|e-113|34.7|493/503|c.82.1.1| HM:SCP:REP 13->495|1bi9A_|2.8e-167|45.3|481/499|c.82.1.1|1/1|ALDH-like| OP:NHOMO 10147 OP:NHOMOORG 1045 OP:PATTERN 221-1-4754454653-312111-A4432-521-11111111211222124431-1--1-13351--1 6995L94799C547KQMAB-AP22JcAAAAAFSRXULW**8N7V68781744UHOD99--EFQ3BFONLKB----111-122H11111--12-211---62637484756--------------12212221221277787---64455334313111113122324555411111111111176845-1-C89999998AAAA99887EDAA6B9AB9HFDF86222221D54555555555555558667711112311111121122-11122---2222111-221111111111122212222222221--111---2-11162223223221-211-2223113131---2211---1--1---1118-5IEEA11111B6GBK54699796FGHIFDHCHGH-46D53J6AOOB-NJJMLMWRNYQQEAAC5BHQCAAC8JKEDEEEEEEADC6476811111111----1111-1111-11-11118APbB2COKDEeadbZcTLLLHcbcfQPNNCOvVxNcWL14GCFD9DB9HEODLP333-112A62444444132BD664413331332223-3333435443333BC15211322211211111111112-11143981894L7DB89AAAA9AC888997BB9BD-1-5421------A967587B998B878BC-9CAC988C7B98ABBABB9IJI99894A98998999A77A797I773667621467688758888--1633122888817DLW222112-----2223KJMGI7G7C9H1KKKKKPOUGRRNOCKHJ3211132122433A566668B88B8999997555------11441111--------2-2----1---1-12-111-12--111111112-2-2-331 ----CC9-A54-9C8IJLKQNQKSURSEECCCCEEDEFEEEEEBDDDDKUUe*oNMFCDDDCD9C6AA4B88D9A995998BA9AD57-KUEJCGEECD9BAGFCF-9NBaOiKPOPDDEBFLGPQBYDv*Q-SPWDFEASEGPEAGEEDI9AbFFDGNKdXCPFCATBEGAKOC5665*55569JGcWLHi77TGVLH ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 500 STR:RPRED 100.0 SQ:SECSTR cccccEETcccGGGccccEEETTEEEccTTccEEEEEcTTTccEEEEEEcccHHHHHHHHHHHHHHHHHTTHHHccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHTTcccEEEccccTEEEEEEEEEccEEEEEcccccTTHHHHHHHHHHHHHTcEEEEEccTTccHHHHHHHHHHHHTTccTTTEEEccccHHHHHHHHHHcTTccEEEEEccHHHHHHHHHHHGGGTcEEEEEccccEEEEEcTTccHHHHHHHHHHHHHGGGGccTTcEEEEEEEHHHHHHHHHHHHHHHHTcccccTTcTTccccccccHHHHHHHHHHHHHHHHTcEEEEcccEEEcEEETTEEccEEEEEEcTTcGGGTccccccEEEEEEEccHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccccEEEEcccccccccccccccGGGEEccccTTTcGGGGEEEEEEEEEccccccccccc DISOP:02AL 1-9, 495-496| PSIPRED ccccccccccHHHHHHHHHEEccEEEccccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccEEEEEEEcccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHccccEEEEEEcccccEEEcccccHHHHHHHHHHHHHHccccEEEcccEEEEEccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccEEccEEEccccccccEEEEcccccEEEEEEcccHHHHHHHHccccccccHHHHHccHHHHHHHHHHccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHEEEEEEEcccccccccc //