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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57626.1
DDBJ      :             putative 4-hydroxyphenylacetate isomerase/decarboxylase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  517/915 : Eukaryota  170/199 : Viruses  0/175   --->[See Alignment]
c.8.7d.177.1
:495 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->214 1wzoB PDBj 8e-36 41.0 %
:BLT:PDB   257->426 3k4iC PDBj 2e-08 27.1 %
:RPS:PDB   5->206 2dfuB PDBj 7e-41 34.8 %
:RPS:PDB   273->445 3c8oB PDBj 3e-20 20.8 %
:RPS:SCOP  16->227 1gttA1  d.177.1.1 * 2e-43 31.3 %
:RPS:SCOP  305->426 1j3lA  c.8.7.1 * 3e-05 22.7 %
:HMM:SCOP  1->224 1nr9A_ d.177.1.1 * 2.4e-54 43.1 %
:HMM:SCOP  274->447 1q5xA_ c.8.7.1 * 3.3e-39 45.3 %
:RPS:PFM   26->206 PF01557 * FAA_hydrolase 4e-28 45.3 %
:RPS:PFM   305->426 PF03737 * Methyltransf_6 9e-09 36.0 %
:HMM:PFM   19->212 PF01557 * FAA_hydrolase 1.9e-51 44.9 187/217  
:HMM:PFM   300->439 PF03737 * Methyltransf_6 4.5e-32 36.4 129/154  
:BLT:SWISS 15->224 HPAG_SALDU 3e-35 41.1 %
:BLT:SWISS 267->452 HPS_METBF 6e-10 29.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57626.1 GT:GENE BAD57626.1 GT:PRODUCT putative 4-hydroxyphenylacetate isomerase/decarboxylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2948167..2949654) GB:FROM 2948167 GB:TO 2949654 GB:DIRECTION - GB:PRODUCT putative 4-hydroxyphenylacetate isomerase/decarboxylase GB:PROTEIN_ID BAD57626.1 LENGTH 495 SQ:AASEQ MTAPSANHLVAGLPSVPGKIIAVHLSYASRATQRGRTPAAPSYFFKPASSLAESGATIERPAGTELLAFEGEVALVIGTPARHVALADAWSHVAWVTAANDWGLYDLRAADKGSNVRNKGRDGYTPLGPRLIDARTVDPAALRVRTWRNGELMQDDTTAGMIFPLAQFVADLSQHLTLEPGDVILTGTPAGSSVARPGDVIEVEVDAPTAAGAPTSGRLVTEVVEGRGDFDPALGSLPAVDDRQREEAWGSRAAAGLPEQTTGLSPELREKLMAAPVAGLSQALRKRGLNNVAIDGVHAMRPGTKLVGTAKTLRFVPNREDLFRSHGGGYNAQKRAFDAVAPGEVIVIEARGERGSGTLGDVLALRAKARGAAGIVTDGGVRDYAAVAEIGVPVFSQGPHPAVLGRKHVPWEVDVAVACGGATVLPGDVIVGDDDGVIVIPADIAEEVADAALAQETEDAWVAEQVAAGHPVDGLFPMNAQWRARYEEVRRGAEQ GT:EXON 1|1-495:0| BL:SWS:NREP 2 BL:SWS:REP 15->224|HPAG_SALDU|3e-35|41.1|202/429| BL:SWS:REP 267->452|HPS_METBF|6e-10|29.0|169/413| SEG 363->374|lalrakargaag| SEG 427->440|gdvivgdddgvivi| BL:PDB:NREP 2 BL:PDB:REP 13->214|1wzoB|8e-36|41.0|195/238| BL:PDB:REP 257->426|3k4iC|2e-08|27.1|155/209| RP:PDB:NREP 2 RP:PDB:REP 5->206|2dfuB|7e-41|34.8|198/249| RP:PDB:REP 273->445|3c8oB|3e-20|20.8|159/161| RP:PFM:NREP 2 RP:PFM:REP 26->206|PF01557|4e-28|45.3|181/213|FAA_hydrolase| RP:PFM:REP 305->426|PF03737|9e-09|36.0|111/150|Methyltransf_6| HM:PFM:NREP 2 HM:PFM:REP 19->212|PF01557|1.9e-51|44.9|187/217|FAA_hydrolase| HM:PFM:REP 300->439|PF03737|4.5e-32|36.4|129/154|Methyltransf_6| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01557|IPR002529| GO:PFM GO:0008152|"GO:metabolic process"|PF01557|IPR002529| RP:SCP:NREP 2 RP:SCP:REP 16->227|1gttA1|2e-43|31.3|198/213|d.177.1.1| RP:SCP:REP 305->426|1j3lA|3e-05|22.7|110/164|c.8.7.1| HM:SCP:REP 1->224|1nr9A_|2.4e-54|43.1|216/221|d.177.1.1|1/1|FAH| HM:SCP:REP 274->447|1q5xA_|3.3e-39|45.3|159/160|c.8.7.1|1/1|RraA-like| OP:NHOMO 1827 OP:NHOMOORG 743 OP:PATTERN 11---11122222211-112111321122143-1111111111-----211111111-1111211-11 2231431222221253222-211134222221233331992213242112227A5233--114123426211111111----5-1---111--1-----1-221221112---------------11-------111-12211125-111111----------1111111-------------3222211-21122222222422322222112122214413111111112411111111111111111111-----------11--11-----------------------------------------------------12--1-----------211---------2---1221---1-1112111--1-16--1-----32B891136455433333332333-33833635A33-544843567633945313654343245--------421-2412-----------------------------2-3I1-7863969B6763555277A55555-564G5C5715443334227693E7231----111111111---211111--1-1-21111111111111-111112-1---11-------1------------11--1-11--1-------------------------11-------32221211111111122-121211121111222122333322331424243444443432452212222--122244424444---1----------1124--------------2111111-1112244444327123211122-----------------------11122222222-------1----11--------------------------------------1--------11 ----222-----1113433645397772212221213333133222433875EB44443223213111-11-11311-11-2222211-32142223222212211-141324212-11--12-221217E4-32311113-1311-1--2--2-2114422134423233112211117221--21322222311222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 444 STR:RPRED 89.7 SQ:SECSTR ccHHEGGGccEEcccccccEEEEcccccccccEEEEEcGGGEEccccTTcHHHHcccEEEcTTcccEEccEEEEEEEccccccccHHHHGGGEEEEEEEEccEEHHHHHHcHccTHHHHccTTcEEEEEEEEccTcccTTccEEEEEETTEEEEEEEGGGccccHHHHHHHHHTTccccTTcEEEcccccccccccTTcEEEEEETTccEEEEE##########################################cccccccccHHHHHHHccccHHHHHHHcTTTcHHEEcccccEEccccccEEEEEEEEEcccccHccccccGGGcHHHHHHTTccccTEEEEEEcTTccccccccHHHHHHHHHTTccEEEEEEEEccHHHHTTcccEEEEEEEccccccccccccEEcccEEETTEEEcTTcEEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHGGGTTc######### DISOP:02AL 492-495| PSIPRED ccccccccccccccccccEEEEEEccHHHHHHHccccccccEEEEccccccccccccEEEccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHEEccccHHHHHHcccccccccccccccccccccccccccccccEEEEEEccEEEEcccHHHHcccHHHHHHHHHcccccccccEEEEEccccccccccccEEEEEEccccccccccccEEEEEEEEccccEEEcccccccccHHHHHHcccccEEEEEEEEcccccHHHHHHHHcccccHHHHHHHHcccccccccccEEcccccEEEEEEEEEEEEcccccccccccccHHHHHHHHHHccccEEEEEEcccccccEEEHHHHHHHHHHcccEEEEEEcccccHHHHHHccccEEEEEccccccccEEEEEEEccEEEEccEEEccccEEEEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHccc //