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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57633.1
DDBJ      :             putative copper amine oxidase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  57/915 : Eukaryota  149/199 : Viruses  0/175   --->[See Alignment]
b.30.2d.17.2
:644 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->629 1ivuA PDBj 0.0 65.4 %
:RPS:PDB   5->629 1d6uA PDBj 0.0 29.5 %
:RPS:SCOP  12->100 1av4A2  d.17.2.1 * 7e-30 41.7 %
:RPS:SCOP  101->215 1av4A3  d.17.2.1 * 9e-32 69.6 %
:RPS:SCOP  221->638 1a2vA1  b.30.2.1 * e-153 39.0 %
:HMM:SCOP  10->100 1w6gA2 d.17.2.1 * 1.7e-27 58.0 %
:HMM:SCOP  101->215 1w6gA3 d.17.2.1 * 6.4e-34 43.5 %
:HMM:SCOP  216->631 1w6gA1 b.30.2.1 * 1.4e-163 50.0 %
:RPS:PFM   103->202 PF02728 * Cu_amine_oxidN3 4e-10 39.8 %
:RPS:PFM   224->629 PF01179 * Cu_amine_oxid e-132 57.1 %
:HMM:PFM   223->631 PF01179 * Cu_amine_oxid 2.9e-168 53.3 405/411  
:HMM:PFM   103->202 PF02728 * Cu_amine_oxidN3 1.9e-25 39.8 98/101  
:HMM:PFM   11->92 PF02727 * Cu_amine_oxidN2 5.2e-09 37.5 80/86  
:BLT:SWISS 3->636 AMOH_ARTGO 0.0 66.9 %
:PROS 374->387|PS01164|COPPER_AMINE_OXID_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57633.1 GT:GENE BAD57633.1 GT:PRODUCT putative copper amine oxidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2958232..2960166 GB:FROM 2958232 GB:TO 2960166 GB:DIRECTION + GB:PRODUCT putative copper amine oxidase GB:PROTEIN_ID BAD57633.1 LENGTH 644 SQ:AASEQ MPTLTPVRVDHPLALPTADEIAEVRAIVDGAGLVTEHTRFVYVGLAEPDKYAVYERPGDLDRRFRVLLHDTRRPNAVDLLVGLGTREVLAQRTLDAVVDGQLPVLDEEFGLVEEILATDPDWLRALADRGLDVAQVRVAPLSAGVFYYEGEHGRRILRGLAFLQEHDKDHAWAHPIDGLVAFVDVMTREVLRVIDTGPVPVPATSGNYTDPEVVGPLRTTQKPIEITQPQGPSFTVTGNLVEWEKWSLRVGFDAREGLVLHQIGFRDGDRVRPIIHRAAISEMVVPYGDPSPIRSWQNYFDTGEYLVGRYANALELGCDCVGDITYFDAVIADEAGNPRTLRNAICMHEEDFGVLWKHTDLWAGSHEVRRQRRLVISFFTTIGNYDYGFFWYLYLDGTIEFEAKATGIPFTSAYPGPEHPYASEIAPGLGAPYHQHLFNARLDMMVDGHRNRVDEVESQRVPMGPGNPHGNAFTLRRTTLASEAQAQRTADNRAGRTWHIVNPEVTNALGNPVGYVLYPEGREPLLADDESSVAARAAFATKHLWVTRYAPEELYAAGDFVNQHHGGAGLPSYVAGDRSLDGEDLVVWHSFGLTHFPRPEDWPIMPVDYAGFVLKPHGFFDRNPALDVPVTTAAHCHSSGGCHE GT:EXON 1|1-644:0| BL:SWS:NREP 1 BL:SWS:REP 3->636|AMOH_ARTGO|0.0|66.9|631/684| PROS 374->387|PS01164|COPPER_AMINE_OXID_1|PDOC00895| BL:PDB:NREP 1 BL:PDB:REP 12->629|1ivuA|0.0|65.4|613/620| RP:PDB:NREP 1 RP:PDB:REP 5->629|1d6uA|0.0|29.5|614/717| RP:PFM:NREP 2 RP:PFM:REP 103->202|PF02728|4e-10|39.8|98/100|Cu_amine_oxidN3| RP:PFM:REP 224->629|PF01179|e-132|57.1|401/408|Cu_amine_oxid| HM:PFM:NREP 3 HM:PFM:REP 223->631|PF01179|2.9e-168|53.3|405/411|Cu_amine_oxid| HM:PFM:REP 103->202|PF02728|1.9e-25|39.8|98/101|Cu_amine_oxidN3| HM:PFM:REP 11->92|PF02727|5.2e-09|37.5|80/86|Cu_amine_oxidN2| GO:PFM:NREP 10 GO:PFM GO:0005507|"GO:copper ion binding"|PF02728|IPR015802| GO:PFM GO:0008131|"GO:amine oxidase activity"|PF02728|IPR015802| GO:PFM GO:0009308|"GO:amine metabolic process"|PF02728|IPR015802| GO:PFM GO:0048038|"GO:quinone binding"|PF02728|IPR015802| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02728|IPR015802| GO:PFM GO:0005507|"GO:copper ion binding"|PF01179|IPR015798| GO:PFM GO:0008131|"GO:amine oxidase activity"|PF01179|IPR015798| GO:PFM GO:0009308|"GO:amine metabolic process"|PF01179|IPR015798| GO:PFM GO:0048038|"GO:quinone binding"|PF01179|IPR015798| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01179|IPR015798| RP:SCP:NREP 3 RP:SCP:REP 12->100|1av4A2|7e-30|41.7|84/88|d.17.2.1| RP:SCP:REP 101->215|1av4A3|9e-32|69.6|115/115|d.17.2.1| RP:SCP:REP 221->638|1a2vA1|e-153|39.0|418/436|b.30.2.1| HM:SCP:REP 10->100|1w6gA2|1.7e-27|58.0|88/0|d.17.2.1|1/1|Amine oxidase N-terminal region| HM:SCP:REP 101->215|1w6gA3|6.4e-34|43.5|115/0|d.17.2.1|1/1|Amine oxidase N-terminal region| HM:SCP:REP 216->631|1w6gA1|1.4e-163|50.0|416/0|b.30.2.1|1/1|Amine oxidase catalytic domain| OP:NHOMO 642 OP:NHOMOORG 209 OP:PATTERN -------11-----1----------------------------------------------------- --1-1---------1------2--12------21111-43---1--------411----------------------------------------------------------------------------------------------1---11------------1111-------------------------------------------------------------2-----------------------------------------------------------------------------------------------------------------------------------------------------------11------1----------------------1--1------1----------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------1---1---11--111---1-1---1-1111111-----------------------------------------------------111--------------------11111------------------------------------------------------------------------------------------------------------------------- --------------1337467748676554444112666667644433248BED86622222322111-2--232-----122222-1-23134232111212112-21-B33222-2112332782438H4-345--32532B3-2422411421133-----7--------4-33218---24568A3A21-4349- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 643 STR:RPRED 99.8 SQ:SECSTR #ccEEccccccTTccccHHHHHHHHHHHHTcTTccTTcEEEEEEEEcccHHHHHHHccccccccEEEEEEEETTEEEEEEEETTTTEEEEEEEETcccTccccccHHHHHHHHHHHHTcHHHHHHHHHTTccGGGEEEEEEcccccTTTTcTTccEEEEEEEEccccccGcGGcccTTEEEEEETTTTEEEEEEEcccccccccccccccTcccTcccccccccccccTTcccEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEcccccTTTTTcEEcHHHHHcTTTTcccccTTTTccTTcEEEEEEEEcTTccEEEEEEEEEEEEEEEEEEEEEcccTTcccEEEEEEEEEEEEEEEETTTEEEEEEEEETTccEEEEEcEEEcccccTTHHHHTccEEEEETTEEEEcEEEEEEEEEEEcTTccEEEEEEEEEEEEEccccccccEEEEEEEEEEccHHHHcccccccTTcEEEEEEEEEEcTTccEEEEEEEccccccccccTTcHHHHHcGGGGccEEEEEccTTcccTTccccTTccccccHHHHHHTccccccEEEEEEEEEEEEEcccGGGcccEEEEEEEEEEEEEccccccTTccccTcEEEETTccTTcTT DISOP:02AL 1-4, 210-226, 638-644| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEEccHHHHHHHcccccccEEEEEEEEcccccEEEEEEEccccEEEEEEcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHcccHHHEEEEEEEcccccccccccccEEEEEEEEEEcccccEEEEccccEEEEEEccccEEEEEEEcccccccccccccccccccccccccccccEEEccccccEEEEccEEEEccEEEEEEEccccccEEEEEEEEccccEEEEEEEEEEEEEEEEEccccccccEEEEEEEcccccccccccccccccccccEEEEEEEEEcccccEEEEEcEEEEEEEcccccEEEEcccccEEEEEEccEEEEEEEHHHHcEEEEEEEEEccccEEEEEEEEEEEEEEEEEcccccccccEEEcccEEEcEEEEEEEEEEEcccccccEEEEEEEEEEEccccccccccEEEEEEEEccHHHHHcccccccccEEEEEcccccccccccEEEEEEccccccccccccccHHHHHccccccEEEEEcccccccccccccccccccccHHHHHccccccccccEEEEEEccEEccccccccccccccEEEEEEEEcccccccccccccccccccccccccccc //