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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57643.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  73/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
a.211.1d.17.4
:349 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   233->305 1buqA PDBj 4e-07 41.1 %
:RPS:PDB   34->125 2cqzA PDBj 1e-06 16.5 %
:RPS:PDB   231->341 3bb9B PDBj 1e-09 14.5 %
:RPS:SCOP  34->171 2paqA1  a.211.1.1 * 3e-09 16.7 %
:RPS:SCOP  220->341 1m98A2  d.17.4.6 * 5e-10 12.3 %
:HMM:SCOP  34->108 2paqA1 a.211.1.1 * 7.1e-06 31.5 %
:HMM:SCOP  232->343 1hkxA_ d.17.4.7 * 2.7e-16 30.6 %
:HMM:PFM   34->123 PF01966 * HD 1.1e-11 25.3 83/118  
:HMM:PFM   243->299 PF02136 * NTF2 2.2e-05 29.8 57/118  
:BLT:SWISS 32->144 CYAH_MYRVE 2e-06 26.5 %
:BLT:SWISS 233->305 SDIS_COMTE 2e-06 41.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57643.1 GT:GENE BAD57643.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2985149..2986198) GB:FROM 2985149 GB:TO 2986198 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57643.1 LENGTH 349 SQ:AASEQ MTVREADRTGFAFPTSELAVAADALVAEVSSPLVYNHVVRAYLYAREMAAATGLRAGTDYDDELLYLGCILHDLGATDYAQGDQRFEVDGADAAAEFLRVRDVAEDRIQVVWNAIALHSTDGIAHRFGTEVALTQMGTGADIIGRGRELLPAGFAERVHAAWPRLDVGYAFGEVLARQVRDNPAKGSPLTFPGQLCQLYYPDQPAVTWFDVVDAAGWHDRPVPIGDRPVGAATPEELATLFTRYFNAGDLDGLLSLYEPGAVLFPMPGERRTGLDAIRESLRGMLDSGARIELTVRGVHVAGELALIANDSVLTGAGPDGTLVSTTTEIARRGSDGSWRYVLDDPYFTA GT:EXON 1|1-349:0| BL:SWS:NREP 2 BL:SWS:REP 32->144|CYAH_MYRVE|2e-06|26.5|113/244| BL:SWS:REP 233->305|SDIS_COMTE|2e-06|41.1|73/125| SEG 16->31|selavaadalvaevss| BL:PDB:NREP 1 BL:PDB:REP 233->305|1buqA|4e-07|41.1|73/125| RP:PDB:NREP 2 RP:PDB:REP 34->125|2cqzA|1e-06|16.5|91/173| RP:PDB:REP 231->341|3bb9B|1e-09|14.5|110/120| HM:PFM:NREP 2 HM:PFM:REP 34->123|PF01966|1.1e-11|25.3|83/118|HD| HM:PFM:REP 243->299|PF02136|2.2e-05|29.8|57/118|NTF2| RP:SCP:NREP 2 RP:SCP:REP 34->171|2paqA1|3e-09|16.7|132/177|a.211.1.1| RP:SCP:REP 220->341|1m98A2|5e-10|12.3|122/142|d.17.4.6| HM:SCP:REP 34->108|2paqA1|7.1e-06|31.5|73/0|a.211.1.1|1/1|HD-domain/PDEase-like| HM:SCP:REP 232->343|1hkxA_|2.7e-16|30.6|111/0|d.17.4.7|1/1|NTF2-like| OP:NHOMO 118 OP:NHOMOORG 85 OP:PATTERN -------------------------------------------------------------------- --1-1---------111-------13-----1-2122231-1-11----11----1----11--11111------------------------------------3-------------------------------------------------------------------------------------------------------------------1----------1-------------------1---------------------------------------------------------------------------------------------------------------------------1----------2-------1--------------111--1---2---------13----------------1---------1-1-------------------------------------1------2211112-----1146------2-3-2----1-------1-----11-------------------------------------------------1-------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------1-11-------1--111---------------------------------------------------------------------------------------------------------- ----------------11--------1---------------------141-12----1-------------------------------1-1----------1----------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 74.5 SQ:SECSTR ###############################HHHHHHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHTTTTHHHHccccTTTTTTccHHHHHHHHHHHTcGGGHHHHHHHHHTccHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHH########################################################HHHHHEEcTTcHHHHHHHHHHHTcHHHHHHHEEEEEEEEETTTEEEccHHHHHHHTHHHHHHHTEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEcTTccEEEEEETEEE## DISOP:02AL 1-3, 348-349| PSIPRED ccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHcccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHcccccEEEcccccccccHHHHHHHHHHHHHccccEEEEEEEHEEcccEEEEEEcEEEEEccccccHHHHHHHHHHHcccccEEEEEEcccccc //